Strain Fitness in Erwinia amylovora T8 around OLJFJH_09375

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
1,939,319	+		OLJFJH_09365	0.76	-1.6
1,939,319	+		OLJFJH_09365	0.76	-1.1
1,939,319	+		OLJFJH_09365	0.76	-0.6
1,939,319	+		OLJFJH_09365	0.76	-1.1
1,939,319	+		OLJFJH_09365	0.76	-1.1
1,939,327	-		OLJFJH_09365	0.77	-0.9
1,939,398	+		OLJFJH_09365	0.87	+0.4
1,939,399	-		OLJFJH_09365	0.87	+0.6
1,939,430	+				+1.2
1,939,509	+				-0.5
1,939,676	+		OLJFJH_09370	0.29	+0.2
1,939,676	+		OLJFJH_09370	0.29	-0.8
1,939,677	-		OLJFJH_09370	0.29	-0.1
1,939,677	-		OLJFJH_09370	0.29	-0.1
1,939,677	-		OLJFJH_09370	0.29	-0.0
1,939,861	+		OLJFJH_09370	0.59	+0.0
1,939,861	+		OLJFJH_09370	0.59	+0.1
1,939,861	+		OLJFJH_09370	0.59	+1.2
1,939,929	+		OLJFJH_09370	0.70	-0.6
1,939,930	-		OLJFJH_09370	0.70	+0.9
1,939,954	-		OLJFJH_09370	0.74	-1.4
1,940,035	+		OLJFJH_09370	0.86	-0.4
1,940,059	+				-0.1
1,940,141	+				-0.1
1,940,179	+				-0.6
1,940,179	+				+0.1
1,940,180	-				+2.4
1,940,182	+				-0.5
1,940,217	-				-0.8
1,940,229	+				-1.1
1,940,229	+				-0.0
1,940,229	+				+0.6
1,940,230	-				-0.4
1,940,230	-				-0.3
1,940,233	+				+0.4
1,940,234	-				-1.8
1,940,235	+				+0.1
1,940,298	+				-1.4
1,940,356	-				-1.4
1,940,367	+				-0.3
1,940,562	+		OLJFJH_09375	0.26	-1.1
1,940,563	-		OLJFJH_09375	0.26	-1.6
1,940,590	+		OLJFJH_09375	0.28	+1.7
1,940,590	+		OLJFJH_09375	0.28	-1.3
1,940,599	-		OLJFJH_09375	0.29	-0.1
1,940,599	-		OLJFJH_09375	0.29	-0.3
1,940,599	-		OLJFJH_09375	0.29	-1.0
1,940,622	+		OLJFJH_09375	0.31	-1.6
1,940,627	-		OLJFJH_09375	0.32	+0.0
1,940,641	+		OLJFJH_09375	0.33	-2.5
1,940,642	-		OLJFJH_09375	0.33	-1.5
1,940,642	-		OLJFJH_09375	0.33	-1.4
1,940,643	+		OLJFJH_09375	0.33	-0.7
1,940,644	-		OLJFJH_09375	0.33	-1.3
1,940,672	-		OLJFJH_09375	0.36	-2.8
1,940,672	-		OLJFJH_09375	0.36	-1.9
1,940,672	-		OLJFJH_09375	0.36	-3.5
1,940,718	+		OLJFJH_09375	0.40	-0.3
1,940,718	+		OLJFJH_09375	0.40	-0.2
1,940,718	+		OLJFJH_09375	0.40	+0.2
1,940,719	-		OLJFJH_09375	0.40	-0.2
1,940,719	-		OLJFJH_09375	0.40	-1.7
1,940,719	-		OLJFJH_09375	0.40	-1.1
1,940,721	+		OLJFJH_09375	0.40	-0.8
1,940,722	-		OLJFJH_09375	0.40	-1.8
1,940,897	+		OLJFJH_09375	0.55	+1.0
1,940,901	+		OLJFJH_09375	0.56	-0.9
1,940,902	-		OLJFJH_09375	0.56	-0.9
1,940,906	-		OLJFJH_09375	0.56	+0.6
1,940,923	-		OLJFJH_09375	0.58	-1.4
1,941,010	-		OLJFJH_09375	0.65	-1.4
1,941,164	+		OLJFJH_09375	0.79	+0.1
1,941,216	+		OLJFJH_09375	0.84	-0.3
1,941,226	+		OLJFJH_09375	0.84	-0.6
1,941,227	-		OLJFJH_09375	0.84	+0.6
1,941,338	+				-1.1
1,941,338	+				-0.6
1,941,385	+				+0.2
1,941,452	+				-0.4
1,941,453	-				-1.1
1,941,484	+				-0.6
1,941,484	+				+1.4
1,941,571	+		OLJFJH_09380	0.12	-0.5
1,941,748	+		OLJFJH_09380	0.30	-0.2
1,941,748	+		OLJFJH_09380	0.30	-0.2
1,941,749	-		OLJFJH_09380	0.30	+0.0
1,941,749	-		OLJFJH_09380	0.30	-0.2
1,942,013	+		OLJFJH_09380	0.56	-0.2
1,942,013	+		OLJFJH_09380	0.56	-1.4
1,942,014	-		OLJFJH_09380	0.56	+0.2
1,942,014	-		OLJFJH_09380	0.56	+0.2
1,942,062	-		OLJFJH_09380	0.61	+0.7
1,942,110	-		OLJFJH_09380	0.66	+0.5
1,942,110	-		OLJFJH_09380	0.66	-1.4
1,942,122	-		OLJFJH_09380	0.67	+0.1
1,942,197	-		OLJFJH_09380	0.75	-0.4
1,942,214	+		OLJFJH_09380	0.77	-0.4
1,942,214	+		OLJFJH_09380	0.77	+0.6
1,942,295	-		OLJFJH_09380	0.85	-0.8
1,942,400	-				-0.5