Strain Fitness in Erwinia amylovora T8 around OLJFJH_09335

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
1,933,624	+		OLJFJH_09330	0.32	-0.3
1,933,624	+		OLJFJH_09330	0.32	+0.4
1,933,625	-		OLJFJH_09330	0.32	-0.4
1,933,645	+		OLJFJH_09330	0.33	+1.1
1,933,689	-		OLJFJH_09330	0.37	-1.5
1,933,689	-		OLJFJH_09330	0.37	-1.5
1,933,689	-		OLJFJH_09330	0.37	-0.3
1,933,689	-		OLJFJH_09330	0.37	+0.7
1,933,713	+		OLJFJH_09330	0.38	-0.9
1,933,724	+		OLJFJH_09330	0.39	-0.5
1,933,833	-		OLJFJH_09330	0.47	-0.3
1,933,919	+		OLJFJH_09330	0.53	-1.1
1,933,919	+		OLJFJH_09330	0.53	-0.0
1,933,920	-		OLJFJH_09330	0.53	+0.0
1,933,920	-		OLJFJH_09330	0.53	-1.5
1,933,920	-		OLJFJH_09330	0.53	+0.2
1,934,300	-		OLJFJH_09330	0.79	-0.3
1,934,544	+				-0.4
1,934,594	+				+0.0
1,934,595	-				+0.5
1,934,595	-				-0.3
1,934,595	-				-1.2
1,934,595	-				-0.1
1,934,595	-				-0.6
1,934,595	-				-0.7
1,934,595	-				-1.1
1,934,598	-				+1.3
1,934,620	+		OLJFJH_09335	0.13	-0.2
1,934,620	+		OLJFJH_09335	0.13	-1.4
1,934,620	+		OLJFJH_09335	0.13	-0.7
1,934,620	+		OLJFJH_09335	0.13	-1.2
1,934,621	-		OLJFJH_09335	0.13	-0.5
1,934,621	-		OLJFJH_09335	0.13	-0.3
1,934,717	+		OLJFJH_09335	0.27	-1.3
1,934,776	-		OLJFJH_09335	0.36	+1.4
1,934,918	+		OLJFJH_09335	0.57	-0.3
1,934,918	+		OLJFJH_09335	0.57	-0.9
1,934,918	+		OLJFJH_09335	0.57	-1.3
1,934,919	-		OLJFJH_09335	0.57	-1.1
1,935,042	-		OLJFJH_09335	0.76	-0.5
1,935,042	-		OLJFJH_09335	0.76	+1.1
1,935,094	-		OLJFJH_09335	0.84	-1.3
1,935,116	+		OLJFJH_09335	0.87	-1.4
1,935,166	+				-1.5
1,935,167	-				-0.9
1,935,189	-				-1.3
1,935,189	-				-0.0
1,935,290	+				-0.2
1,935,290	+				-0.9
1,935,290	+				+0.7
1,935,290	+				+0.5
1,935,290	+				-0.3
1,935,290	+				+0.3
1,935,290	+				+0.1
1,935,291	-				+1.4
1,935,291	-				-0.0
1,935,291	-				-0.5
1,935,291	-				-0.1
1,935,291	-				-0.1
1,935,291	-				+0.5
1,935,291	-				-0.5
1,935,420	+		OLJFJH_09340	0.40	+0.1
1,935,420	+		OLJFJH_09340	0.40	-0.4
1,935,420	+		OLJFJH_09340	0.40	+0.2
1,935,421	-		OLJFJH_09340	0.40	+0.4
1,935,455	+		OLJFJH_09340	0.51	-0.2
1,935,455	+		OLJFJH_09340	0.51	-0.4
1,935,456	-		OLJFJH_09340	0.51	+0.4
1,935,479	-		OLJFJH_09340	0.58	+0.8
1,935,479	-		OLJFJH_09340	0.58	+0.1
1,935,613	-				-0.2
1,935,635	+				-0.0
1,935,819	+				-0.4