Strain Fitness in Erwinia amylovora T8 around OLJFJH_09065

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
1,873,081	+				+0.1
1,873,081	+				-0.0
1,873,081	+				-0.2
1,873,081	+				+0.1
1,873,081	+				+1.1
1,873,082	-				-3.2
1,873,086	+				-1.0
1,873,086	+				-0.8
1,873,103	+				+0.7
1,873,103	+				+0.5
1,873,103	+				+1.4
1,873,105	+				+0.4
1,873,144	+				-1.0
1,874,043	+				+0.7
1,874,044	-				-2.2
1,874,044	-				-0.6
1,874,245	-		OLJFJH_09065	0.27	-1.1
1,874,259	-		OLJFJH_09065	0.28	+0.2
1,874,259	-		OLJFJH_09065	0.28	-0.8
1,874,259	-		OLJFJH_09065	0.28	+0.2
1,874,313	+		OLJFJH_09065	0.35	-1.4
1,874,390	+		OLJFJH_09065	0.45	+0.2
1,874,390	+		OLJFJH_09065	0.45	+1.7
1,874,390	+		OLJFJH_09065	0.45	+0.2
1,874,391	-		OLJFJH_09065	0.45	-0.8
1,874,523	+		OLJFJH_09065	0.62	-1.1
1,874,686	+		OLJFJH_09065	0.82	-0.3
1,874,729	+		OLJFJH_09065	0.87	-0.6
1,874,808	-				-1.1
1,875,010	-		OLJFJH_09070	0.31	+1.1
1,875,086	+		OLJFJH_09070	0.45	-0.4
1,875,115	+		OLJFJH_09070	0.50	+0.1
1,875,141	+		OLJFJH_09070	0.54	-0.2
1,875,141	+		OLJFJH_09070	0.54	+0.2
1,875,141	+		OLJFJH_09070	0.54	-0.1
1,875,142	-		OLJFJH_09070	0.55	+0.2
1,875,168	-		OLJFJH_09070	0.59	-2.7
1,875,168	-		OLJFJH_09070	0.59	-0.7
1,875,205	-		OLJFJH_09070	0.66	+0.9
1,875,279	-		OLJFJH_09070	0.79	-0.5
1,875,300	+		OLJFJH_09070	0.82	-0.3
1,875,300	+		OLJFJH_09070	0.82	+0.2
1,875,301	-		OLJFJH_09070	0.82	+1.7
1,875,439	-				+0.2
1,875,492	+				+0.5
1,875,551	+				+0.5
1,875,551	+				+0.3
1,875,551	+				+0.3
1,875,552	-				+0.4
1,875,564	-				-0.3
1,875,564	-				-2.4