Strain Fitness in Erwinia amylovora T8 around OLJFJH_08390

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
1,726,135	+				-0.1
1,726,182	+				-0.6
1,726,182	+				-0.6
1,726,182	+				-0.1
1,726,182	+				+0.7
1,726,183	-				+1.4
1,726,198	+				-0.1
1,726,255	+				+0.1
1,726,256	-				-0.6
1,726,256	-				-0.7
1,726,256	-				-1.6
1,726,256	-				-0.4
1,726,259	+				-0.2
1,726,259	+				-0.1
1,726,259	+				-0.2
1,726,259	+				-0.2
1,726,259	+				-0.0
1,726,259	+				+1.7
1,726,260	-				-0.1
1,726,260	-				+0.1
1,726,260	-				-2.0
1,726,260	-				-1.4
1,726,260	-				+0.4
1,726,260	-				+0.0
1,726,260	-				-0.8
1,726,261	+				-0.2
1,726,261	+				-0.3
1,726,265	+				-0.2
1,726,265	+				-0.0
1,726,266	-				+0.5
1,726,444	+				-0.6
1,726,460	-				-1.4
1,726,876	-		OLJFJH_08390	0.61	-0.6
1,726,940	-		OLJFJH_08390	0.71	-2.4
1,727,088	-				-0.9
1,727,350	-		OLJFJH_08395	0.49	+0.0
1,727,538	+				-0.2
1,727,735	+				-1.1
1,727,736	-				-0.7
1,727,969	-		OLJFJH_08400	0.40	-0.5
1,727,970	+		OLJFJH_08400	0.40	+1.2
1,728,053	+		OLJFJH_08400	0.66	-0.4