Strain Fitness in Erwinia amylovora T8 around OLJFJH_07030

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
1,430,598	+		OLJFJH_07025	0.49	-0.5
1,430,604	-		OLJFJH_07025	0.49	-0.6
1,430,649	+		OLJFJH_07025	0.52	-2.6
1,430,733	+		OLJFJH_07025	0.57	-1.3
1,430,733	+		OLJFJH_07025	0.57	+0.2
1,430,734	-		OLJFJH_07025	0.57	+0.3
1,430,991	+		OLJFJH_07025	0.71	-1.3
1,431,031	+		OLJFJH_07025	0.73	-1.4
1,431,060	+		OLJFJH_07025	0.75	-0.2
1,431,177	+		OLJFJH_07025	0.82	+0.7
1,431,482	-				-0.8
1,431,483	+				-2.2
1,431,634	-				-0.4
1,431,662	+				-0.7
1,431,662	+				-0.7
1,431,663	-				-1.0
1,431,663	-				-0.8
1,431,663	-				-1.3
1,431,663	-				-0.9
1,431,716	+				-1.3
1,431,717	-				-1.4
1,431,768	-				-0.1
1,431,808	-				-0.2
1,431,808	-				-0.2
1,431,932	+				-1.9
1,431,933	-				-1.2
1,432,101	+		OLJFJH_07030	0.10	-0.8
1,432,151	+		OLJFJH_07030	0.11	-0.6
1,432,341	-		OLJFJH_07030	0.15	-1.1
1,432,349	+		OLJFJH_07030	0.15	-1.3
1,432,350	-		OLJFJH_07030	0.15	-0.8
1,432,350	-		OLJFJH_07030	0.15	-1.3
1,432,375	-		OLJFJH_07030	0.15	-0.2
1,432,375	-		OLJFJH_07030	0.15	-0.7
1,432,431	+		OLJFJH_07030	0.16	-0.6
1,432,431	+		OLJFJH_07030	0.16	-0.8
1,432,431	+		OLJFJH_07030	0.16	-2.0
1,432,432	-		OLJFJH_07030	0.16	+0.5
1,432,433	+		OLJFJH_07030	0.16	-0.4
1,432,433	+		OLJFJH_07030	0.16	-1.9
1,432,434	-		OLJFJH_07030	0.16	-1.5
1,432,434	-		OLJFJH_07030	0.16	-0.3
1,432,485	+		OLJFJH_07030	0.17	-2.1
1,432,486	-		OLJFJH_07030	0.17	-2.7
1,432,706	+		OLJFJH_07030	0.21	-1.5
1,432,707	-		OLJFJH_07030	0.21	-1.0
1,433,177	+		OLJFJH_07030	0.30	-0.9
1,433,178	-		OLJFJH_07030	0.30	-0.8
1,433,178	-		OLJFJH_07030	0.30	-1.3
1,433,296	-		OLJFJH_07030	0.32	-0.3
1,433,560	-		OLJFJH_07030	0.37	-0.5
1,433,607	+		OLJFJH_07030	0.37	-0.7
1,433,646	-		OLJFJH_07030	0.38	-1.0
1,433,649	+		OLJFJH_07030	0.38	-1.4
1,433,722	+		OLJFJH_07030	0.40	-0.2
1,433,778	+		OLJFJH_07030	0.41	+0.4
1,433,814	-		OLJFJH_07030	0.41	-1.2
1,433,814	-		OLJFJH_07030	0.41	-1.2
1,433,854	-		OLJFJH_07030	0.42	-0.9
1,433,889	-		OLJFJH_07030	0.43	-0.2
1,434,040	+		OLJFJH_07030	0.45	-0.8
1,434,081	-		OLJFJH_07030	0.46	+1.0
1,434,094	-		OLJFJH_07030	0.46	-0.6
1,434,577	-		OLJFJH_07030	0.55	-0.9
1,434,624	+		OLJFJH_07030	0.56	-1.2
1,434,636	+		OLJFJH_07030	0.56	+0.1
1,434,636	+		OLJFJH_07030	0.56	-2.1
1,434,637	-		OLJFJH_07030	0.56	-1.8
1,434,816	-		OLJFJH_07030	0.59	-0.5
1,434,816	-		OLJFJH_07030	0.59	-0.7
1,434,947	+		OLJFJH_07030	0.62	-0.5
1,434,948	-		OLJFJH_07030	0.62	-0.4
1,434,948	-		OLJFJH_07030	0.62	-0.8
1,434,963	+		OLJFJH_07030	0.62	+0.3
1,434,963	+		OLJFJH_07030	0.62	-0.4
1,434,986	+		OLJFJH_07030	0.62	-1.4
1,434,986	+		OLJFJH_07030	0.62	+1.1
1,435,022	+		OLJFJH_07030	0.63	-1.9
1,435,022	+		OLJFJH_07030	0.63	-0.4
1,435,331	+		OLJFJH_07030	0.69	-0.7
1,435,331	+		OLJFJH_07030	0.69	-1.7
1,435,331	+		OLJFJH_07030	0.69	-1.7
1,435,387	-		OLJFJH_07030	0.70	-1.1
1,435,673	+		OLJFJH_07030	0.75	-0.5
1,435,673	+		OLJFJH_07030	0.75	+1.5
1,435,673	+		OLJFJH_07030	0.75	-1.0
1,435,673	+		OLJFJH_07030	0.75	-1.6
1,435,673	+		OLJFJH_07030	0.75	+0.2
1,435,674	-		OLJFJH_07030	0.75	-1.4
1,435,674	-		OLJFJH_07030	0.75	-0.8
1,435,674	-		OLJFJH_07030	0.75	-1.7
1,435,674	-		OLJFJH_07030	0.75	-2.1
1,435,676	+		OLJFJH_07030	0.75	-0.0
1,435,676	+		OLJFJH_07030	0.75	-1.5
1,435,676	+		OLJFJH_07030	0.75	-1.3
1,435,676	+		OLJFJH_07030	0.75	-0.5
1,435,676	+		OLJFJH_07030	0.75	-1.9
1,435,677	-		OLJFJH_07030	0.75	-1.1
1,435,677	-		OLJFJH_07030	0.75	-0.4
1,435,677	-		OLJFJH_07030	0.75	-0.7
1,435,677	-		OLJFJH_07030	0.75	-0.8
1,435,679	+		OLJFJH_07030	0.75	-0.6
1,435,680	-		OLJFJH_07030	0.75	-1.0
1,435,847	+		OLJFJH_07030	0.78	+1.8
1,435,847	+		OLJFJH_07030	0.78	-0.7
1,435,848	-		OLJFJH_07030	0.78	-1.6
1,435,848	-		OLJFJH_07030	0.78	-1.7
1,435,848	-		OLJFJH_07030	0.78	-0.9
1,435,871	+		OLJFJH_07030	0.78	-1.5
1,435,962	+		OLJFJH_07030	0.80	-0.9
1,435,964	+		OLJFJH_07030	0.80	-1.5
1,436,107	+		OLJFJH_07030	0.83	-1.7
1,436,107	+		OLJFJH_07030	0.83	-0.6
1,436,108	-		OLJFJH_07030	0.83	-0.6
1,436,108	-		OLJFJH_07030	0.83	-0.7
1,436,108	-		OLJFJH_07030	0.83	-1.0
1,436,317	+		OLJFJH_07030	0.86	-1.7
1,436,629	+				-1.3
1,436,844	+				-1.0
1,436,869	+				+0.9
1,436,870	-				-1.0
1,437,035	+				-0.6
1,437,036	-				-1.4
1,437,097	+				-0.4
1,437,149	+				-0.7
1,437,149	+				+0.2
1,437,149	+				-1.4
1,437,210	-				-0.2
1,437,266	+				-1.0
1,437,352	+				-2.8
1,437,404	-				-0.4
1,437,408	-				+2.1
1,437,481	+				+0.0
1,437,482	-				+0.4
1,437,485	+				+0.2
1,437,485	+				+0.1
1,437,485	+				-0.9
1,437,485	+				+0.3
1,437,485	+				+0.2
1,437,486	-				+2.3
1,437,486	-				-0.4
1,437,486	-				+0.1
1,437,486	-				+1.0
1,437,505	+				-0.7
1,437,505	+				+0.3
1,437,505	+				-0.3
1,437,505	+				-0.2
1,437,506	-				-0.5
1,437,506	-				+0.2
1,437,536	-				-0.9
1,437,625	-				-1.5
1,437,653	-				+0.0
1,437,653	-				-0.5
1,437,782	+				+1.5
1,437,912	+				+0.9
1,437,912	+				+0.7
1,437,939	-				-0.3
1,438,053	+				+0.7
1,438,053	+				+0.2
1,438,053	+				-0.4
1,438,053	+				-0.5
1,438,053	+				-0.4
1,438,053	+				+0.3
1,438,054	-				+0.8
1,438,054	-				-0.4
1,438,054	-				+0.1
1,438,054	-				+0.0
1,438,054	-				+0.7
1,438,056	-				+0.5
1,438,056	-				+3.3
1,438,056	-				+0.9