Strain Fitness in Erwinia amylovora T8 around OLJFJH_06515

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
1,320,516	-				-0.1
1,320,524	+				+0.3
1,320,565	+				+0.7
1,320,566	-				-2.3
1,320,574	-				-1.9
1,320,574	-				-0.2
1,320,575	+				-0.5
1,320,576	-				+2.8
1,320,603	+				-0.9
1,320,615	+				-1.5
1,320,628	+				-0.4
1,320,642	+				-0.6
1,320,666	+		OLJFJH_06515	0.19	-0.9
1,320,833	-		OLJFJH_06515	0.84	-0.9
1,320,833	-		OLJFJH_06515	0.84	+0.1
1,320,833	-		OLJFJH_06515	0.84	-0.9
1,320,870	+				-1.1
1,320,871	-				+0.3
1,320,888	+				+0.9
1,320,888	+				+0.3
1,321,093	+		OLJFJH_06520	0.40	+0.0
1,321,094	-		OLJFJH_06520	0.40	+0.3
1,321,163	+		OLJFJH_06520	0.53	+1.0
1,321,204	+		OLJFJH_06520	0.60	+0.1
1,321,204	+		OLJFJH_06520	0.60	+0.8
1,321,205	-		OLJFJH_06520	0.61	+1.0
1,321,393	+				+0.3
1,321,393	+				+0.8
1,321,394	-				+0.9
1,321,428	-				-1.1
1,321,435	-				-0.1
1,321,539	+		OLJFJH_06525	0.16	+0.9
1,321,544	-		OLJFJH_06525	0.16	+0.2
1,321,594	-		OLJFJH_06525	0.23	-0.4
1,321,684	+		OLJFJH_06525	0.35	-0.4
1,321,775	-		OLJFJH_06525	0.47	-0.3
1,321,775	-		OLJFJH_06525	0.47	-0.4
1,321,795	+		OLJFJH_06525	0.49	-0.9