Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03935 and OLJFJH_03940 are separated by 290 nucleotides OLJFJH_03940 and OLJFJH_03945 are separated by 138 nucleotides OLJFJH_03945 and OLJFJH_03950 are separated by 138 nucleotides OLJFJH_03950 and OLJFJH_03955 are separated by 56 nucleotides
OLJFJH_03935: OLJFJH_03935 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 747,529 to 748,365
_03935
OLJFJH_03940: OLJFJH_03940 - Protein SlyX, at 748,656 to 748,874
_03940
OLJFJH_03945: OLJFJH_03945 - peptidylprolyl isomerase, at 749,013 to 749,555
_03945
OLJFJH_03950: OLJFJH_03950 - DUF2387 domain-containing protein, at 749,694 to 749,888
_03950
OLJFJH_03955: OLJFJH_03955 - glutathione-regulated potassium-efflux system protein KefB, at 749,945 to 751,750
_03955
Position (kb) 749
750 Strain fitness (log2 ratio) -1
0
1
2
3 at 748.080 kb on + strand, within OLJFJH_03935 at 748.122 kb on + strand, within OLJFJH_03935 at 748.123 kb on - strand, within OLJFJH_03935 at 748.127 kb on - strand, within OLJFJH_03935 at 748.127 kb on - strand, within OLJFJH_03935 at 748.172 kb on + strand, within OLJFJH_03935 at 748.172 kb on + strand, within OLJFJH_03935 at 748.173 kb on - strand, within OLJFJH_03935 at 748.224 kb on + strand, within OLJFJH_03935 at 748.428 kb on - strand at 748.429 kb on + strand at 748.429 kb on + strand at 748.430 kb on - strand at 748.463 kb on + strand at 748.463 kb on + strand at 748.567 kb on + strand at 748.642 kb on - strand at 748.662 kb on + strand at 748.663 kb on - strand at 748.663 kb on - strand at 748.663 kb on - strand at 748.931 kb on - strand at 748.984 kb on + strand at 748.984 kb on + strand at 749.315 kb on + strand, within OLJFJH_03945 at 749.518 kb on + strand at 749.519 kb on - strand at 749.593 kb on + strand at 749.593 kb on + strand at 749.594 kb on - strand at 749.666 kb on - strand at 749.688 kb on + strand at 749.807 kb on + strand, within OLJFJH_03950 at 749.873 kb on + strand at 749.883 kb on - strand at 749.883 kb on - strand at 749.883 kb on - strand at 749.889 kb on - strand at 749.946 kb on + strand at 749.947 kb on - strand at 750.089 kb on - strand at 750.089 kb on - strand at 750.089 kb on - strand at 750.089 kb on - strand at 750.190 kb on + strand, within OLJFJH_03955 at 750.409 kb on - strand, within OLJFJH_03955 at 750.411 kb on + strand, within OLJFJH_03955 at 750.473 kb on - strand, within OLJFJH_03955
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3 remove 748,080 + OLJFJH_03935 0.66 +0.7 748,122 + OLJFJH_03935 0.71 +3.1 748,123 - OLJFJH_03935 0.71 -0.1 748,127 - OLJFJH_03935 0.71 +0.1 748,127 - OLJFJH_03935 0.71 +0.0 748,172 + OLJFJH_03935 0.77 +1.9 748,172 + OLJFJH_03935 0.77 -0.3 748,173 - OLJFJH_03935 0.77 -0.6 748,224 + OLJFJH_03935 0.83 -0.1 748,428 - +0.1 748,429 + -0.1 748,429 + +0.1 748,430 - -0.5 748,463 + +0.5 748,463 + +0.3 748,567 + +0.4 748,642 - -1.2 748,662 + -0.3 748,663 - -1.7 748,663 - -0.1 748,663 - -0.4 748,931 - -1.4 748,984 + -0.0 748,984 + -1.4 749,315 + OLJFJH_03945 0.56 -1.0 749,518 + -1.3 749,519 - -0.1 749,593 + -0.7 749,593 + -1.7 749,594 - +0.3 749,666 - -0.8 749,688 + +0.4 749,807 + OLJFJH_03950 0.58 -0.9 749,873 + -0.0 749,883 - -0.3 749,883 - -0.3 749,883 - -0.9 749,889 - -0.6 749,946 + -0.8 749,947 - -0.0 750,089 - +0.1 750,089 - -1.4 750,089 - -0.3 750,089 - +0.3 750,190 + OLJFJH_03955 0.14 +0.3 750,409 - OLJFJH_03955 0.26 -1.6 750,411 + OLJFJH_03955 0.26 +0.0 750,473 - OLJFJH_03955 0.29 +0.2
Or see this region's nucleotide sequence