Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03575 and OLJFJH_03580 are separated by 192 nucleotides OLJFJH_03580 and OLJFJH_03585 are separated by 109 nucleotides OLJFJH_03585 and OLJFJH_03590 are separated by 118 nucleotides
OLJFJH_03575: OLJFJH_03575 - MATE family efflux transporter DinF, at 689,074 to 690,396
_03575
OLJFJH_03580: OLJFJH_03580 - transcriptional repressor LexA, at 690,589 to 691,197
_03580
OLJFJH_03585: OLJFJH_03585 - diacylglycerol kinase, at 691,307 to 691,672
_03585
OLJFJH_03590: OLJFJH_03590 - glycerol-3-phosphate 1-O-acyltransferase PlsB, at 691,791 to 694,223
_03590
Position (kb) 690
691
692 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 689.673 kb on + strand, within OLJFJH_03575 at 689.673 kb on + strand, within OLJFJH_03575 at 689.674 kb on - strand, within OLJFJH_03575 at 689.674 kb on - strand, within OLJFJH_03575 at 689.725 kb on - strand, within OLJFJH_03575 at 689.801 kb on + strand, within OLJFJH_03575 at 689.801 kb on + strand, within OLJFJH_03575 at 689.801 kb on + strand, within OLJFJH_03575 at 689.802 kb on - strand, within OLJFJH_03575 at 689.802 kb on - strand, within OLJFJH_03575 at 689.802 kb on - strand, within OLJFJH_03575 at 689.848 kb on - strand, within OLJFJH_03575 at 689.927 kb on + strand, within OLJFJH_03575 at 689.928 kb on - strand, within OLJFJH_03575 at 689.928 kb on - strand, within OLJFJH_03575 at 689.928 kb on - strand, within OLJFJH_03575 at 689.932 kb on + strand, within OLJFJH_03575 at 689.932 kb on + strand, within OLJFJH_03575 at 689.932 kb on + strand, within OLJFJH_03575 at 689.933 kb on - strand, within OLJFJH_03575 at 689.956 kb on + strand, within OLJFJH_03575 at 690.003 kb on + strand, within OLJFJH_03575 at 690.004 kb on - strand, within OLJFJH_03575 at 690.004 kb on - strand, within OLJFJH_03575 at 690.004 kb on - strand, within OLJFJH_03575 at 690.004 kb on - strand, within OLJFJH_03575 at 690.117 kb on + strand, within OLJFJH_03575 at 690.118 kb on - strand, within OLJFJH_03575 at 690.118 kb on - strand, within OLJFJH_03575 at 690.118 kb on - strand, within OLJFJH_03575 at 690.118 kb on - strand, within OLJFJH_03575 at 690.118 kb on - strand, within OLJFJH_03575 at 690.118 kb on - strand, within OLJFJH_03575 at 690.118 kb on - strand, within OLJFJH_03575 at 690.127 kb on + strand, within OLJFJH_03575 at 690.128 kb on - strand, within OLJFJH_03575 at 690.192 kb on + strand, within OLJFJH_03575 at 690.219 kb on + strand, within OLJFJH_03575 at 690.219 kb on + strand, within OLJFJH_03575 at 690.220 kb on - strand, within OLJFJH_03575 at 690.267 kb on - strand at 690.267 kb on - strand at 690.267 kb on - strand at 690.330 kb on + strand at 690.372 kb on + strand at 690.373 kb on - strand at 690.388 kb on + strand at 690.405 kb on + strand at 690.406 kb on - strand at 690.406 kb on - strand at 690.426 kb on + strand at 690.427 kb on - strand at 690.461 kb on - strand at 690.490 kb on - strand at 690.513 kb on + strand at 690.545 kb on - strand at 690.576 kb on + strand at 690.577 kb on - strand at 690.919 kb on - strand, within OLJFJH_03580 at 691.235 kb on + strand at 691.237 kb on + strand at 691.238 kb on - strand at 691.238 kb on - strand at 691.361 kb on + strand, within OLJFJH_03585 at 691.367 kb on + strand, within OLJFJH_03585 at 691.481 kb on + strand, within OLJFJH_03585 at 691.482 kb on - strand, within OLJFJH_03585 at 691.663 kb on + strand at 691.663 kb on + strand at 691.664 kb on - strand at 691.664 kb on - strand at 691.673 kb on - strand at 691.704 kb on - strand at 691.704 kb on - strand at 691.727 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3 remove 689,673 + OLJFJH_03575 0.45 -0.2 689,673 + OLJFJH_03575 0.45 +1.3 689,674 - OLJFJH_03575 0.45 +0.3 689,674 - OLJFJH_03575 0.45 -0.4 689,725 - OLJFJH_03575 0.49 -0.4 689,801 + OLJFJH_03575 0.55 -0.3 689,801 + OLJFJH_03575 0.55 +0.3 689,801 + OLJFJH_03575 0.55 -0.7 689,802 - OLJFJH_03575 0.55 +0.1 689,802 - OLJFJH_03575 0.55 -0.1 689,802 - OLJFJH_03575 0.55 -0.2 689,848 - OLJFJH_03575 0.59 +0.5 689,927 + OLJFJH_03575 0.64 -1.7 689,928 - OLJFJH_03575 0.65 -1.1 689,928 - OLJFJH_03575 0.65 -0.1 689,928 - OLJFJH_03575 0.65 +0.1 689,932 + OLJFJH_03575 0.65 -0.1 689,932 + OLJFJH_03575 0.65 +0.2 689,932 + OLJFJH_03575 0.65 -0.1 689,933 - OLJFJH_03575 0.65 +0.3 689,956 + OLJFJH_03575 0.67 -0.2 690,003 + OLJFJH_03575 0.70 -0.9 690,004 - OLJFJH_03575 0.70 -0.5 690,004 - OLJFJH_03575 0.70 -0.1 690,004 - OLJFJH_03575 0.70 -0.0 690,004 - OLJFJH_03575 0.70 -0.0 690,117 + OLJFJH_03575 0.79 -1.2 690,118 - OLJFJH_03575 0.79 +0.7 690,118 - OLJFJH_03575 0.79 -1.0 690,118 - OLJFJH_03575 0.79 -0.5 690,118 - OLJFJH_03575 0.79 -0.4 690,118 - OLJFJH_03575 0.79 +0.7 690,118 - OLJFJH_03575 0.79 +0.3 690,118 - OLJFJH_03575 0.79 -0.6 690,127 + OLJFJH_03575 0.80 -0.4 690,128 - OLJFJH_03575 0.80 -1.0 690,192 + OLJFJH_03575 0.85 +0.2 690,219 + OLJFJH_03575 0.87 -0.2 690,219 + OLJFJH_03575 0.87 -0.1 690,220 - OLJFJH_03575 0.87 -0.4 690,267 - -0.4 690,267 - +0.4 690,267 - +0.4 690,330 + +0.9 690,372 + -0.8 690,373 - -0.1 690,388 + -0.3 690,405 + +0.6 690,406 - -1.0 690,406 - -0.0 690,426 + -1.0 690,427 - -0.3 690,461 - +1.4 690,490 - -0.0 690,513 + -1.1 690,545 - -0.0 690,576 + -0.9 690,577 - -0.6 690,919 - OLJFJH_03580 0.54 -2.2 691,235 + -1.3 691,237 + +0.8 691,238 - -1.2 691,238 - -3.2 691,361 + OLJFJH_03585 0.15 -0.7 691,367 + OLJFJH_03585 0.16 -0.1 691,481 + OLJFJH_03585 0.48 -1.1 691,482 - OLJFJH_03585 0.48 -0.1 691,663 + -0.2 691,663 + +0.0 691,664 - -1.8 691,664 - -0.1 691,673 - -0.7 691,704 - +0.1 691,704 - +0.3 691,727 + -0.0
Or see this region's nucleotide sequence