Strain Fitness in Escherichia coli ECOR38 around HEPCGN_21970

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
3,148,256	-	yfcH	HEPCGN_21960	0.45	-0.2
3,148,387	+	yfcH	HEPCGN_21960	0.59	+1.0
3,148,387	+	yfcH	HEPCGN_21960	0.59	-0.1
3,148,388	-	yfcH	HEPCGN_21960	0.60	-0.8
3,148,397	+	yfcH	HEPCGN_21960	0.61	-0.5
3,148,426	+	yfcH	HEPCGN_21960	0.64	+1.0
3,148,453	-	yfcH	HEPCGN_21960	0.67	+1.8
3,148,530	+	yfcH	HEPCGN_21960	0.75	-1.2
3,148,585	-	yfcH	HEPCGN_21960	0.82	-0.5
3,148,610	-	yfcH	HEPCGN_21960	0.84	+0.1
3,148,718	-				+0.5
3,148,741	+				-0.2
3,148,850	-	folX	HEPCGN_21965	0.22	+0.5
3,148,930	-	folX	HEPCGN_21965	0.44	-0.3
3,148,930	-	folX	HEPCGN_21965	0.44	-2.3
3,148,964	-	folX	HEPCGN_21965	0.53	-0.4
3,149,084	+	folX	HEPCGN_21965	0.87	+0.6
3,149,103	+				-1.4
3,149,111	+				+0.1
3,149,111	+				-0.6
3,149,157	-				+1.1
3,149,157	-				+0.2
3,149,166	+				+0.3
3,149,169	+				+0.0
3,149,408	+	yfcG	HEPCGN_21970	0.34	+0.6
3,149,409	-	yfcG	HEPCGN_21970	0.34	+0.2
3,149,482	+	yfcG	HEPCGN_21970	0.45	-0.0
3,149,534	+	yfcG	HEPCGN_21970	0.53	-0.1
3,149,543	+	yfcG	HEPCGN_21970	0.55	+0.1
3,149,544	-	yfcG	HEPCGN_21970	0.55	+0.9
3,149,823	+				+0.4
3,149,854	-				-0.3
3,149,875	-				+0.5
3,149,877	-				-0.3
3,149,934	+				-0.3
3,149,970	+				+0.1
3,149,970	+				+0.6
3,149,970	+				-0.6
3,149,970	+				+0.0
3,149,971	-				-0.1
3,149,977	+				-0.2
3,149,978	-				+0.4
3,150,023	+				+0.0
3,150,023	+				+0.1
3,150,023	+				-0.9
3,150,073	+	yfcF	HEPCGN_21975	0.16	+0.1
3,150,156	+	yfcF	HEPCGN_21975	0.29	-0.0
3,150,241	+	yfcF	HEPCGN_21975	0.42	-0.4
3,150,242	-	yfcF	HEPCGN_21975	0.42	-1.0
3,150,476	-	yfcF	HEPCGN_21975	0.78	+0.3
3,150,510	+	yfcF	HEPCGN_21975	0.83	-0.5
3,150,511	-	yfcF	HEPCGN_21975	0.84	-0.7
3,150,641	+				-0.4
3,150,641	+				+0.4
3,150,809	-	yfcE	HEPCGN_21980	0.25	+0.6