Strain Fitness in Escherichia coli ECOR27 around NOLOHH_21530

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,231,060	-	rutB	NOLOHH_21520	0.16	-0.2
4,231,184	+	rutB	NOLOHH_21520	0.34	-2.7
4,231,184	+	rutB	NOLOHH_21520	0.34	-1.6
4,231,185	-	rutB	NOLOHH_21520	0.34	+0.6
4,231,249	+	rutB	NOLOHH_21520	0.43	-0.2
4,231,250	-	rutB	NOLOHH_21520	0.43	-1.4
4,231,375	+	rutB	NOLOHH_21520	0.61	+0.7
4,231,375	+	rutB	NOLOHH_21520	0.61	+1.6
4,231,410	+	rutB	NOLOHH_21520	0.66	-1.8
4,231,487	+	rutB	NOLOHH_21520	0.77	-0.2
4,231,487	+	rutB	NOLOHH_21520	0.77	-0.2
4,231,670	+				+2.3
4,231,675	-				+0.7
4,231,741	+	rutC	NOLOHH_21525	0.22	+1.3
4,231,741	+	rutC	NOLOHH_21525	0.22	-0.3
4,231,741	+	rutC	NOLOHH_21525	0.22	-0.5
4,231,741	+	rutC	NOLOHH_21525	0.22	+0.6
4,231,741	+	rutC	NOLOHH_21525	0.22	+0.3
4,231,741	+	rutC	NOLOHH_21525	0.22	+1.1
4,231,741	+	rutC	NOLOHH_21525	0.22	-0.4
4,231,741	+	rutC	NOLOHH_21525	0.22	+0.7
4,231,742	-	rutC	NOLOHH_21525	0.22	+0.3
4,231,742	-	rutC	NOLOHH_21525	0.22	+0.8
4,231,742	-	rutC	NOLOHH_21525	0.22	-0.3
4,231,742	-	rutC	NOLOHH_21525	0.22	+1.5
4,231,742	-	rutC	NOLOHH_21525	0.22	+1.1
4,231,742	-	rutC	NOLOHH_21525	0.22	-0.3
4,231,773	+	rutC	NOLOHH_21525	0.30	-1.8
4,231,773	+	rutC	NOLOHH_21525	0.30	+0.2
4,231,773	+	rutC	NOLOHH_21525	0.30	-0.6
4,231,773	+	rutC	NOLOHH_21525	0.30	-0.6
4,231,774	-	rutC	NOLOHH_21525	0.30	-1.5
4,231,774	-	rutC	NOLOHH_21525	0.30	+0.0
4,231,774	-	rutC	NOLOHH_21525	0.30	-0.8
4,232,206	+	rutD	NOLOHH_21530	0.19	+0.8
4,232,231	+	rutD	NOLOHH_21530	0.22	-1.3
4,232,232	-	rutD	NOLOHH_21530	0.23	-0.3
4,232,442	+	rutD	NOLOHH_21530	0.49	+0.4
4,232,448	-	rutD	NOLOHH_21530	0.50	-0.9
4,232,584	-	rutD	NOLOHH_21530	0.67	+0.0
4,232,827	-				-1.1
4,232,827	-				-0.2
4,232,860	+				+1.5
4,232,970	-	rutE	NOLOHH_21535	0.18	+0.9
4,232,970	-	rutE	NOLOHH_21535	0.18	+0.7
4,233,002	-	rutE	NOLOHH_21535	0.24	-2.3
4,233,002	-	rutE	NOLOHH_21535	0.24	-0.5
4,233,039	+	rutE	NOLOHH_21535	0.30	+0.0
4,233,040	-	rutE	NOLOHH_21535	0.30	+0.8
4,233,317	+	rutE	NOLOHH_21535	0.77	-0.2
4,233,317	+	rutE	NOLOHH_21535	0.77	-1.7
4,233,317	+	rutE	NOLOHH_21535	0.77	-0.7
4,233,317	+	rutE	NOLOHH_21535	0.77	+0.2
4,233,318	-	rutE	NOLOHH_21535	0.77	+0.6
4,233,318	-	rutE	NOLOHH_21535	0.77	-0.1
4,233,318	-	rutE	NOLOHH_21535	0.77	+1.2
4,233,318	-	rutE	NOLOHH_21535	0.77	-2.5
4,233,449	+				+0.6
4,233,450	-				+1.2
4,233,461	+				-0.1
4,233,461	+				+1.3
4,233,461	+				-0.0
4,233,469	+				-0.7
4,233,469	+				-0.3
4,233,470	-				-0.3
4,233,470	-				+0.3
4,233,607	+	rutF	NOLOHH_21540	0.29	-0.8
4,233,678	-	rutF	NOLOHH_21540	0.44	+1.7