Strain Fitness in Escherichia coli ECOR27 around NOLOHH_19530

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,853,280	-	ynbE	NOLOHH_19525	0.70	+0.3
3,853,432	-	ynbE	NOLOHH_19525	0.76	+0.6
3,853,477	-	ynbE	NOLOHH_19525	0.78	-0.1
3,853,543	-	ynbE	NOLOHH_19525	0.80	-0.9
3,853,925	-				+0.5
3,853,932	+				-0.4
3,854,160	+				+0.5
3,854,160	+				-0.6
3,854,160	+				+0.7
3,854,160	+				+0.9
3,854,160	+				+1.2
3,854,286	+				+0.7
3,854,311	+				-1.8
3,854,311	+				+0.7
3,854,311	+				+0.3
3,854,411	+	ldhA	NOLOHH_19530	0.14	-0.8
3,854,415	+	ldhA	NOLOHH_19530	0.15	-1.7
3,854,475	+	ldhA	NOLOHH_19530	0.21	-0.3
3,854,479	+	ldhA	NOLOHH_19530	0.21	+0.6
3,854,479	+	ldhA	NOLOHH_19530	0.21	+0.9
3,854,481	+	ldhA	NOLOHH_19530	0.21	+1.1
3,854,566	+	ldhA	NOLOHH_19530	0.30	+0.3
3,854,646	+	ldhA	NOLOHH_19530	0.38	+0.5
3,854,658	+	ldhA	NOLOHH_19530	0.39	+0.6
3,854,691	+	ldhA	NOLOHH_19530	0.43	-0.4
3,854,691	+	ldhA	NOLOHH_19530	0.43	+0.2
3,854,691	+	ldhA	NOLOHH_19530	0.43	-0.6
3,854,691	+	ldhA	NOLOHH_19530	0.43	-0.4
3,854,691	+	ldhA	NOLOHH_19530	0.43	-0.9
3,854,691	+	ldhA	NOLOHH_19530	0.43	-3.0
3,854,695	+	ldhA	NOLOHH_19530	0.43	-0.4
3,854,695	+	ldhA	NOLOHH_19530	0.43	-0.6
3,854,695	+	ldhA	NOLOHH_19530	0.43	-0.6
3,855,046	+	ldhA	NOLOHH_19530	0.78	+0.2
3,855,198	+				+0.8
3,855,355	-				-0.8
3,855,425	+	hslJ	NOLOHH_19535	0.13	-0.0
3,855,639	-	hslJ	NOLOHH_19535	0.64	+0.1
3,855,662	+	hslJ	NOLOHH_19535	0.69	+1.9
3,855,766	-				-0.9
3,856,099	-				-1.5
3,856,099	-				-0.1
3,856,163	+				+1.0
3,856,164	-				+0.8
3,856,256	+				+0.8
3,856,256	+				-0.1