Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13075

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,530,464	+	rseB	NOLOHH_13060	0.67	-1.6
2,530,464	+	rseB	NOLOHH_13060	0.67	-0.9
2,530,477	+	rseB	NOLOHH_13060	0.68	+0.4
2,530,678	+	rseB	NOLOHH_13060	0.89	-1.7
2,530,679	-	rseB	NOLOHH_13060	0.89	+0.1
2,530,686	+				+0.2
2,530,686	+				-2.9
2,530,686	+				+0.4
2,530,686	+				-0.3
2,530,756	+				-1.4
2,530,756	+				-0.6
2,530,843	-	rseC	NOLOHH_13070	0.14	-0.6
2,531,001	+	rseC	NOLOHH_13070	0.47	-1.1
2,531,020	+	rseC	NOLOHH_13070	0.51	+1.9
2,531,020	+	rseC	NOLOHH_13070	0.51	-0.8
2,531,021	-	rseC	NOLOHH_13070	0.51	-2.5
2,531,021	-	rseC	NOLOHH_13070	0.51	-3.0
2,531,021	-	rseC	NOLOHH_13070	0.51	-0.4
2,531,021	-	rseC	NOLOHH_13070	0.51	-2.0
2,531,021	-	rseC	NOLOHH_13070	0.51	+1.1
2,531,021	-	rseC	NOLOHH_13070	0.51	-2.7
2,531,022	+	rseC	NOLOHH_13070	0.51	-0.6
2,531,022	+	rseC	NOLOHH_13070	0.51	-0.8
2,531,022	+	rseC	NOLOHH_13070	0.51	-1.8
2,531,023	-	rseC	NOLOHH_13070	0.51	-0.5
2,531,023	-	rseC	NOLOHH_13070	0.51	-2.9
2,531,096	+	rseC	NOLOHH_13070	0.66	-0.2
2,531,096	+	rseC	NOLOHH_13070	0.66	-1.0
2,531,096	+	rseC	NOLOHH_13070	0.66	+0.1
2,531,193	-	rseC	NOLOHH_13070	0.87	-2.1
2,531,353	-				+0.6
2,531,357	+				+0.3
2,531,357	+				+0.9
2,531,358	-				-1.8
2,531,376	+				+0.6
2,531,379	+				+0.2
2,531,379	+				-0.3
2,531,379	+				+0.0
2,531,409	+				-0.3
2,531,442	+				-1.8
2,531,442	+				-0.2
2,531,442	+				-0.9
2,532,080	+	lepA	NOLOHH_13075	0.35	-1.0
2,532,080	+	lepA	NOLOHH_13075	0.35	-2.1
2,532,089	+	lepA	NOLOHH_13075	0.35	-1.5
2,532,147	+	lepA	NOLOHH_13075	0.39	+1.3
2,532,147	+	lepA	NOLOHH_13075	0.39	-1.2
2,532,147	+	lepA	NOLOHH_13075	0.39	+0.8
2,532,147	+	lepA	NOLOHH_13075	0.39	+0.1
2,532,339	+	lepA	NOLOHH_13075	0.49	-1.5
2,532,429	+	lepA	NOLOHH_13075	0.54	-1.6
2,532,635	+	lepA	NOLOHH_13075	0.66	+0.8
2,532,635	+	lepA	NOLOHH_13075	0.66	-2.4
2,532,861	+	lepA	NOLOHH_13075	0.78	-3.0
2,532,895	+	lepA	NOLOHH_13075	0.80	-1.8
2,532,895	+	lepA	NOLOHH_13075	0.80	-0.4
2,532,901	+	lepA	NOLOHH_13075	0.80	+0.2
2,532,910	+	lepA	NOLOHH_13075	0.81	-3.5
2,532,910	+	lepA	NOLOHH_13075	0.81	-0.1
2,533,106	+				-2.4
2,534,242	-				+0.7
2,534,244	+				-0.2
2,534,245	-				-2.0