Strain Fitness in Escherichia coli ECOR27 around NOLOHH_08510

Experiment: Casamino-acids

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntftsY and ftsE are separated by 2 nucleotidesftsE and ftsX overlap by 8 nucleotides NOLOHH_08505: ftsY - signal recognition particle-docking protein FtsY, at 1,642,993 to 1,644,486 ftsY NOLOHH_08510: ftsE - cell division ATP-binding protein FtsE, at 1,644,489 to 1,645,157 ftsE NOLOHH_08515: ftsX - permease-like cell division protein FtsX, at 1,645,150 to 1,646,208 ftsX Position (kb) 1644 1645 1646Strain fitness (log2 ratio) -3 -2 -1 0 1at 1644.485 kb on - strandat 1644.560 kb on + strand, within ftsEat 1644.757 kb on + strand, within ftsEat 1644.757 kb on + strand, within ftsEat 1644.777 kb on + strand, within ftsEat 1645.018 kb on + strand, within ftsEat 1645.018 kb on + strand, within ftsEat 1645.376 kb on + strand, within ftsXat 1645.426 kb on - strand, within ftsXat 1645.432 kb on + strand, within ftsXat 1645.716 kb on + strand, within ftsXat 1645.731 kb on + strand, within ftsXat 1646.033 kb on + strand, within ftsX

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino-acids
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1,644,485 - -0.3
1,644,560 + ftsE NOLOHH_08510 0.11 -0.4
1,644,757 + ftsE NOLOHH_08510 0.40 -1.0
1,644,757 + ftsE NOLOHH_08510 0.40 -1.2
1,644,777 + ftsE NOLOHH_08510 0.43 -1.3
1,645,018 + ftsE NOLOHH_08510 0.79 -2.5
1,645,018 + ftsE NOLOHH_08510 0.79 -0.7
1,645,376 + ftsX NOLOHH_08515 0.21 +1.4
1,645,426 - ftsX NOLOHH_08515 0.26 -1.0
1,645,432 + ftsX NOLOHH_08515 0.27 +0.3
1,645,716 + ftsX NOLOHH_08515 0.53 -2.8
1,645,731 + ftsX NOLOHH_08515 0.55 -0.0
1,646,033 + ftsX NOLOHH_08515 0.83 +0.8

Or see this region's nucleotide sequence