Strain Fitness in Escherichia coli ECOR27 around NOLOHH_11115

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,151,126	-	hemW	NOLOHH_11105	0.72	-0.2
2,151,126	-	hemW	NOLOHH_11105	0.72	-2.0
2,151,264	-	hemW	NOLOHH_11105	0.85	-1.0
2,151,325	-	hemW	NOLOHH_11105	0.90	-2.3
2,151,411	+				-0.7
2,151,440	+				-0.2
2,151,441	-				+0.8
2,151,441	-				-0.6
2,151,445	-				-1.4
2,151,541	-	rdgB	NOLOHH_11110	0.18	-1.8
2,151,656	-	rdgB	NOLOHH_11110	0.38	-0.0
2,151,656	-	rdgB	NOLOHH_11110	0.38	+0.3
2,151,656	-	rdgB	NOLOHH_11110	0.38	-0.7
2,151,656	-	rdgB	NOLOHH_11110	0.38	+0.5
2,151,657	+	rdgB	NOLOHH_11110	0.38	-2.2
2,151,657	+	rdgB	NOLOHH_11110	0.38	-1.7
2,151,657	+	rdgB	NOLOHH_11110	0.38	+1.1
2,151,657	+	rdgB	NOLOHH_11110	0.38	+0.8
2,151,658	-	rdgB	NOLOHH_11110	0.38	+1.8
2,151,775	+	rdgB	NOLOHH_11110	0.58	-1.6
2,151,805	-	rdgB	NOLOHH_11110	0.63	+0.0
2,152,026	-				-1.4
2,152,030	+				-0.3
2,152,031	-				+0.0
2,152,034	+				-0.4
2,152,035	-				-0.1
2,152,035	-				-0.1
2,152,035	-				+1.8
2,152,035	-				-2.2
2,152,035	-				-1.2
2,152,038	+				-0.2
2,152,039	-				+1.3
2,152,039	-				-0.2
2,152,043	-				-0.7
2,152,087	-	yggU	NOLOHH_11115	0.19	+0.8
2,152,123	+	yggU	NOLOHH_11115	0.31	-1.6
2,152,222	-	yggU	NOLOHH_11115	0.65	-1.6
2,152,238	-	yggU	NOLOHH_11115	0.70	-1.3
2,152,275	+	yggU	NOLOHH_11115	0.83	+0.3
2,152,276	-	yggU	NOLOHH_11115	0.84	+1.3
2,152,277	+	yggU	NOLOHH_11115	0.84	-0.3
2,152,277	+	yggU	NOLOHH_11115	0.84	+0.8
2,152,278	-	yggU	NOLOHH_11115	0.84	+0.7
2,152,278	-	yggU	NOLOHH_11115	0.84	-0.8
2,152,278	-	yggU	NOLOHH_11115	0.84	+0.4
2,152,278	-	yggU	NOLOHH_11115	0.84	+0.2
2,152,285	+	yggU	NOLOHH_11115	0.87	+0.3
2,152,286	-	yggU	NOLOHH_11115	0.87	-1.1
2,152,306	-				+0.3
2,152,369	-				-1.9
2,152,372	-				+0.9
2,152,400	-	yggT	NOLOHH_11120	0.14	-0.1
2,152,918	-				+0.1
2,152,918	-				-0.9
2,153,055	-	yggS	NOLOHH_11125	0.21	-0.8
2,153,087	+	yggS	NOLOHH_11125	0.26	-1.3
2,153,087	+	yggS	NOLOHH_11125	0.26	+0.8
2,153,088	-	yggS	NOLOHH_11125	0.26	-0.8
2,153,088	-	yggS	NOLOHH_11125	0.26	+1.3
2,153,088	-	yggS	NOLOHH_11125	0.26	-3.5
2,153,092	-	yggS	NOLOHH_11125	0.27	-2.2
2,153,092	-	yggS	NOLOHH_11125	0.27	-2.0
2,153,092	-	yggS	NOLOHH_11125	0.27	-0.3
2,153,092	-	yggS	NOLOHH_11125	0.27	-0.7
2,153,201	-	yggS	NOLOHH_11125	0.42	-2.6
2,153,215	+	yggS	NOLOHH_11125	0.44	-2.7
2,153,215	+	yggS	NOLOHH_11125	0.44	-0.3
2,153,305	+	yggS	NOLOHH_11125	0.57	+0.4