Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yiiE and NOLOHH_06110 are separated by 426 nucleotides NOLOHH_06110 and NOLOHH_06115 are separated by 85 nucleotides NOLOHH_06115 and NOLOHH_06120 are separated by 0 nucleotides NOLOHH_06120 and NOLOHH_06125 are separated by 228 nucleotides
NOLOHH_06105: yiiE - Uncharacterized protein YiiE, at 1,150,275 to 1,150,493
yiiE
NOLOHH_06110: NOLOHH_06110 - hypothetical protein, at 1,150,920 to 1,151,012
_06110
NOLOHH_06115: NOLOHH_06115 - transcriptional regulator, at 1,151,098 to 1,151,388
_06115
NOLOHH_06120: NOLOHH_06120 - Toxin HigB-2, at 1,151,389 to 1,151,700
_06120
NOLOHH_06125: NOLOHH_06125 - alpha/beta hydrolase, at 1,151,929 to 1,152,837
_06125
Position (kb)
1151
1152 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1150.418 kb on + strand, within yiiE at 1150.505 kb on + strand at 1150.509 kb on + strand at 1150.509 kb on + strand at 1150.511 kb on + strand at 1150.512 kb on - strand at 1150.686 kb on + strand at 1150.692 kb on + strand at 1150.693 kb on - strand at 1150.694 kb on + strand at 1150.698 kb on - strand at 1150.755 kb on - strand at 1150.776 kb on + strand at 1150.792 kb on + strand at 1150.804 kb on - strand at 1150.829 kb on - strand at 1150.849 kb on - strand at 1150.980 kb on - strand, within NOLOHH_06110 at 1150.980 kb on - strand, within NOLOHH_06110 at 1151.013 kb on - strand at 1151.013 kb on - strand at 1151.069 kb on - strand at 1151.069 kb on - strand at 1151.087 kb on + strand at 1151.106 kb on + strand at 1151.200 kb on - strand, within NOLOHH_06115 at 1151.241 kb on + strand, within NOLOHH_06115 at 1151.242 kb on - strand, within NOLOHH_06115 at 1151.390 kb on + strand at 1151.390 kb on + strand at 1151.391 kb on - strand at 1151.391 kb on - strand at 1151.404 kb on + strand at 1151.405 kb on - strand at 1151.405 kb on - strand at 1151.462 kb on + strand, within NOLOHH_06120 at 1151.466 kb on + strand, within NOLOHH_06120 at 1151.467 kb on - strand, within NOLOHH_06120 at 1151.486 kb on + strand, within NOLOHH_06120 at 1151.486 kb on + strand, within NOLOHH_06120 at 1151.486 kb on + strand, within NOLOHH_06120 at 1151.507 kb on + strand, within NOLOHH_06120 at 1151.507 kb on + strand, within NOLOHH_06120 at 1151.508 kb on - strand, within NOLOHH_06120 at 1151.508 kb on - strand, within NOLOHH_06120 at 1151.584 kb on + strand, within NOLOHH_06120 at 1151.585 kb on - strand, within NOLOHH_06120 at 1151.587 kb on + strand, within NOLOHH_06120 at 1151.587 kb on + strand, within NOLOHH_06120 at 1151.588 kb on - strand, within NOLOHH_06120 at 1151.588 kb on - strand, within NOLOHH_06120 at 1151.597 kb on + strand, within NOLOHH_06120 at 1151.597 kb on + strand, within NOLOHH_06120 at 1151.598 kb on - strand, within NOLOHH_06120 at 1151.598 kb on - strand, within NOLOHH_06120 at 1151.767 kb on + strand at 1151.767 kb on + strand at 1151.767 kb on + strand at 1151.768 kb on - strand at 1151.768 kb on - strand at 1151.768 kb on - strand at 1151.779 kb on - strand at 1151.918 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.926 kb on - strand at 1151.926 kb on - strand at 1151.926 kb on - strand at 1151.926 kb on - strand at 1151.929 kb on - strand at 1152.006 kb on + strand at 1152.006 kb on + strand at 1152.028 kb on + strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.071 kb on + strand, within NOLOHH_06125 at 1152.076 kb on - strand, within NOLOHH_06125 at 1152.113 kb on + strand, within NOLOHH_06125 at 1152.113 kb on + strand, within NOLOHH_06125 at 1152.114 kb on - strand, within NOLOHH_06125 at 1152.141 kb on - strand, within NOLOHH_06125 at 1152.152 kb on + strand, within NOLOHH_06125 at 1152.157 kb on + strand, within NOLOHH_06125 at 1152.160 kb on + strand, within NOLOHH_06125 at 1152.160 kb on + strand, within NOLOHH_06125 at 1152.161 kb on - strand, within NOLOHH_06125 at 1152.161 kb on - strand, within NOLOHH_06125 at 1152.163 kb on + strand, within NOLOHH_06125 at 1152.163 kb on + strand, within NOLOHH_06125 at 1152.164 kb on - strand, within NOLOHH_06125 at 1152.164 kb on - strand, within NOLOHH_06125 at 1152.226 kb on + strand, within NOLOHH_06125 at 1152.226 kb on + strand, within NOLOHH_06125 at 1152.227 kb on - strand, within NOLOHH_06125 at 1152.229 kb on + strand, within NOLOHH_06125 at 1152.259 kb on + strand, within NOLOHH_06125 at 1152.279 kb on + strand, within NOLOHH_06125 at 1152.279 kb on + strand, within NOLOHH_06125 at 1152.279 kb on + strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.369 kb on - strand, within NOLOHH_06125 at 1152.369 kb on - strand, within NOLOHH_06125 at 1152.369 kb on - strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.470 kb on - strand, within NOLOHH_06125 at 1152.474 kb on + strand, within NOLOHH_06125 at 1152.474 kb on + strand, within NOLOHH_06125 at 1152.474 kb on + strand, within NOLOHH_06125 at 1152.475 kb on - strand, within NOLOHH_06125 at 1152.475 kb on - strand, within NOLOHH_06125 at 1152.505 kb on + strand, within NOLOHH_06125 at 1152.505 kb on + strand, within NOLOHH_06125 at 1152.506 kb on - strand, within NOLOHH_06125 at 1152.506 kb on - strand, within NOLOHH_06125 at 1152.506 kb on - strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.527 kb on - strand, within NOLOHH_06125 at 1152.527 kb on - strand, within NOLOHH_06125 at 1152.527 kb on - strand, within NOLOHH_06125 at 1152.568 kb on + strand, within NOLOHH_06125 at 1152.568 kb on + strand, within NOLOHH_06125 at 1152.568 kb on + strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.697 kb on + strand, within NOLOHH_06125 at 1152.698 kb on - strand, within NOLOHH_06125 at 1152.698 kb on - strand, within NOLOHH_06125
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 1,150,418 + yiiE NOLOHH_06105 0.65 +0.2 1,150,505 + +0.1 1,150,509 + +1.5 1,150,509 + +0.7 1,150,511 + -1.1 1,150,512 - -2.3 1,150,686 + -0.4 1,150,692 + -2.3 1,150,693 - +1.5 1,150,694 + +0.1 1,150,698 - -0.5 1,150,755 - +1.2 1,150,776 + +0.3 1,150,792 + -0.6 1,150,804 - +0.8 1,150,829 - +0.6 1,150,849 - +0.0 1,150,980 - NOLOHH_06110 0.65 -0.4 1,150,980 - NOLOHH_06110 0.65 -2.6 1,151,013 - +1.5 1,151,013 - +0.8 1,151,069 - +0.4 1,151,069 - -0.4 1,151,087 + -0.8 1,151,106 + -1.0 1,151,200 - NOLOHH_06115 0.35 +0.7 1,151,241 + NOLOHH_06115 0.49 +0.0 1,151,242 - NOLOHH_06115 0.49 +0.1 1,151,390 + -2.0 1,151,390 + +0.1 1,151,391 - +1.2 1,151,391 - +1.5 1,151,404 + -0.5 1,151,405 - -2.8 1,151,405 - +0.7 1,151,462 + NOLOHH_06120 0.23 -1.0 1,151,466 + NOLOHH_06120 0.25 -1.0 1,151,467 - NOLOHH_06120 0.25 -0.0 1,151,486 + NOLOHH_06120 0.31 +0.7 1,151,486 + NOLOHH_06120 0.31 -2.1 1,151,486 + NOLOHH_06120 0.31 +0.2 1,151,507 + NOLOHH_06120 0.38 +0.0 1,151,507 + NOLOHH_06120 0.38 +0.4 1,151,508 - NOLOHH_06120 0.38 -1.0 1,151,508 - NOLOHH_06120 0.38 -0.3 1,151,584 + NOLOHH_06120 0.62 -0.1 1,151,585 - NOLOHH_06120 0.63 -0.5 1,151,587 + NOLOHH_06120 0.63 -1.2 1,151,587 + NOLOHH_06120 0.63 -1.1 1,151,588 - NOLOHH_06120 0.64 +1.4 1,151,588 - NOLOHH_06120 0.64 -0.9 1,151,597 + NOLOHH_06120 0.67 -1.2 1,151,597 + NOLOHH_06120 0.67 -0.5 1,151,598 - NOLOHH_06120 0.67 +1.6 1,151,598 - NOLOHH_06120 0.67 +1.3 1,151,767 + -1.0 1,151,767 + -0.0 1,151,767 + -0.8 1,151,768 - -0.3 1,151,768 - +0.2 1,151,768 - -0.9 1,151,779 - +1.1 1,151,918 + -1.8 1,151,925 + +0.4 1,151,925 + +0.0 1,151,925 + -1.2 1,151,925 + +0.6 1,151,925 + +0.2 1,151,925 + -2.4 1,151,925 + -0.1 1,151,925 + -2.7 1,151,925 + -1.0 1,151,925 + -0.4 1,151,925 + -0.8 1,151,925 + -0.1 1,151,926 - -1.5 1,151,926 - -1.2 1,151,926 - -0.3 1,151,926 - +0.6 1,151,929 - -1.7 1,152,006 + -0.1 1,152,006 + -0.0 1,152,028 + NOLOHH_06125 0.11 +1.0 1,152,029 - NOLOHH_06125 0.11 +0.4 1,152,029 - NOLOHH_06125 0.11 -0.3 1,152,029 - NOLOHH_06125 0.11 +0.9 1,152,029 - NOLOHH_06125 0.11 +0.3 1,152,029 - NOLOHH_06125 0.11 +1.4 1,152,071 + NOLOHH_06125 0.16 -2.0 1,152,076 - NOLOHH_06125 0.16 -1.1 1,152,113 + NOLOHH_06125 0.20 -0.8 1,152,113 + NOLOHH_06125 0.20 -1.6 1,152,114 - NOLOHH_06125 0.20 -1.5 1,152,141 - NOLOHH_06125 0.23 -0.7 1,152,152 + NOLOHH_06125 0.25 -1.5 1,152,157 + NOLOHH_06125 0.25 -0.4 1,152,160 + NOLOHH_06125 0.25 -0.6 1,152,160 + NOLOHH_06125 0.25 -0.8 1,152,161 - NOLOHH_06125 0.26 -1.9 1,152,161 - NOLOHH_06125 0.26 -0.2 1,152,163 + NOLOHH_06125 0.26 -0.3 1,152,163 + NOLOHH_06125 0.26 +0.8 1,152,164 - NOLOHH_06125 0.26 -0.1 1,152,164 - NOLOHH_06125 0.26 -2.8 1,152,226 + NOLOHH_06125 0.33 +1.9 1,152,226 + NOLOHH_06125 0.33 +0.7 1,152,227 - NOLOHH_06125 0.33 +0.6 1,152,229 + NOLOHH_06125 0.33 -1.7 1,152,259 + NOLOHH_06125 0.36 -0.2 1,152,279 + NOLOHH_06125 0.39 -0.7 1,152,279 + NOLOHH_06125 0.39 -2.0 1,152,279 + NOLOHH_06125 0.39 -2.1 1,152,280 - NOLOHH_06125 0.39 -1.5 1,152,280 - NOLOHH_06125 0.39 -0.1 1,152,280 - NOLOHH_06125 0.39 -0.9 1,152,280 - NOLOHH_06125 0.39 -0.8 1,152,366 + NOLOHH_06125 0.48 +0.7 1,152,366 + NOLOHH_06125 0.48 -1.4 1,152,366 + NOLOHH_06125 0.48 +0.0 1,152,366 + NOLOHH_06125 0.48 -0.8 1,152,366 + NOLOHH_06125 0.48 -1.0 1,152,366 + NOLOHH_06125 0.48 +0.7 1,152,367 - NOLOHH_06125 0.48 +1.1 1,152,367 - NOLOHH_06125 0.48 +0.7 1,152,367 - NOLOHH_06125 0.48 -2.2 1,152,367 - NOLOHH_06125 0.48 -1.3 1,152,367 - NOLOHH_06125 0.48 -1.8 1,152,367 - NOLOHH_06125 0.48 +0.4 1,152,367 - NOLOHH_06125 0.48 +0.3 1,152,367 - NOLOHH_06125 0.48 -2.4 1,152,367 - NOLOHH_06125 0.48 -0.7 1,152,369 - NOLOHH_06125 0.48 -0.1 1,152,369 - NOLOHH_06125 0.48 -2.8 1,152,369 - NOLOHH_06125 0.48 -1.6 1,152,464 + NOLOHH_06125 0.59 +0.6 1,152,464 + NOLOHH_06125 0.59 -0.1 1,152,464 + NOLOHH_06125 0.59 +1.4 1,152,464 + NOLOHH_06125 0.59 -0.9 1,152,470 - NOLOHH_06125 0.60 +1.2 1,152,474 + NOLOHH_06125 0.60 +0.7 1,152,474 + NOLOHH_06125 0.60 +1.8 1,152,474 + NOLOHH_06125 0.60 -0.1 1,152,475 - NOLOHH_06125 0.60 -0.8 1,152,475 - NOLOHH_06125 0.60 -0.0 1,152,505 + NOLOHH_06125 0.63 +0.8 1,152,505 + NOLOHH_06125 0.63 -2.0 1,152,506 - NOLOHH_06125 0.63 +0.4 1,152,506 - NOLOHH_06125 0.63 -0.1 1,152,506 - NOLOHH_06125 0.63 -2.4 1,152,509 + NOLOHH_06125 0.64 -1.2 1,152,509 + NOLOHH_06125 0.64 +0.6 1,152,509 + NOLOHH_06125 0.64 -0.1 1,152,509 + NOLOHH_06125 0.64 +1.3 1,152,509 + NOLOHH_06125 0.64 +0.6 1,152,509 + NOLOHH_06125 0.64 +2.3 1,152,509 + NOLOHH_06125 0.64 -1.0 1,152,510 - NOLOHH_06125 0.64 -0.7 1,152,510 - NOLOHH_06125 0.64 -0.1 1,152,510 - NOLOHH_06125 0.64 +1.0 1,152,510 - NOLOHH_06125 0.64 -2.9 1,152,510 - NOLOHH_06125 0.64 -0.8 1,152,526 + NOLOHH_06125 0.66 -0.6 1,152,526 + NOLOHH_06125 0.66 +1.8 1,152,526 + NOLOHH_06125 0.66 -0.8 1,152,526 + NOLOHH_06125 0.66 -0.2 1,152,526 + NOLOHH_06125 0.66 -0.0 1,152,527 - NOLOHH_06125 0.66 +0.1 1,152,527 - NOLOHH_06125 0.66 +0.1 1,152,527 - NOLOHH_06125 0.66 +0.8 1,152,568 + NOLOHH_06125 0.70 +0.2 1,152,568 + NOLOHH_06125 0.70 +0.1 1,152,568 + NOLOHH_06125 0.70 +0.3 1,152,569 - NOLOHH_06125 0.70 +0.8 1,152,569 - NOLOHH_06125 0.70 +1.2 1,152,569 - NOLOHH_06125 0.70 -2.0 1,152,569 - NOLOHH_06125 0.70 -0.5 1,152,644 + NOLOHH_06125 0.79 -3.7 1,152,644 + NOLOHH_06125 0.79 -0.2 1,152,644 + NOLOHH_06125 0.79 +0.9 1,152,644 + NOLOHH_06125 0.79 +0.1 1,152,644 + NOLOHH_06125 0.79 -3.0 1,152,644 + NOLOHH_06125 0.79 -1.1 1,152,644 + NOLOHH_06125 0.79 +1.1 1,152,645 - NOLOHH_06125 0.79 +0.1 1,152,645 - NOLOHH_06125 0.79 +1.1 1,152,645 - NOLOHH_06125 0.79 -0.5 1,152,645 - NOLOHH_06125 0.79 +1.1 1,152,645 - NOLOHH_06125 0.79 -1.1 1,152,645 - NOLOHH_06125 0.79 -0.0 1,152,645 - NOLOHH_06125 0.79 +0.2 1,152,645 - NOLOHH_06125 0.79 +0.6 1,152,645 - NOLOHH_06125 0.79 -0.4 1,152,648 + NOLOHH_06125 0.79 -0.2 1,152,648 + NOLOHH_06125 0.79 -1.4 1,152,648 + NOLOHH_06125 0.79 -1.1 1,152,648 + NOLOHH_06125 0.79 +0.4 1,152,648 + NOLOHH_06125 0.79 +0.2 1,152,648 + NOLOHH_06125 0.79 -1.9 1,152,648 + NOLOHH_06125 0.79 -0.5 1,152,648 + NOLOHH_06125 0.79 +0.7 1,152,648 + NOLOHH_06125 0.79 -0.8 1,152,648 + NOLOHH_06125 0.79 -0.8 1,152,649 - NOLOHH_06125 0.79 -0.6 1,152,649 - NOLOHH_06125 0.79 +0.2 1,152,649 - NOLOHH_06125 0.79 +1.1 1,152,649 - NOLOHH_06125 0.79 -0.4 1,152,649 - NOLOHH_06125 0.79 -0.7 1,152,649 - NOLOHH_06125 0.79 +0.1 1,152,649 - NOLOHH_06125 0.79 +0.5 1,152,649 - NOLOHH_06125 0.79 +0.6 1,152,697 + NOLOHH_06125 0.84 -1.3 1,152,698 - NOLOHH_06125 0.85 +0.7 1,152,698 - NOLOHH_06125 0.85 -0.5
Or see this region's nucleotide sequence