Strain Fitness in Escherichia coli ECOR27 around NOLOHH_01165

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
124,336	+	maa	NOLOHH_01155	0.58	+1.4
124,337	-	maa	NOLOHH_01155	0.58	+0.2
124,340	+	maa	NOLOHH_01155	0.59	-0.2
124,340	+	maa	NOLOHH_01155	0.59	-1.1
124,375	+	maa	NOLOHH_01155	0.65	-0.6
124,376	-	maa	NOLOHH_01155	0.65	+2.1
124,376	-	maa	NOLOHH_01155	0.65	+0.8
124,624	+				+1.0
124,640	+				+1.8
124,666	+				-0.2
124,666	+				+0.2
124,693	+				+1.4
124,694	-				+1.5
124,805	+	ylaC	NOLOHH_01160	0.26	-1.1
124,809	+	ylaC	NOLOHH_01160	0.27	+0.1
124,810	-	ylaC	NOLOHH_01160	0.27	-1.2
124,810	-	ylaC	NOLOHH_01160	0.27	+0.6
124,810	-	ylaC	NOLOHH_01160	0.27	-1.8
124,810	-	ylaC	NOLOHH_01160	0.27	-1.1
124,810	-	ylaC	NOLOHH_01160	0.27	-0.1
124,810	-	ylaC	NOLOHH_01160	0.27	-2.9
124,810	-	ylaC	NOLOHH_01160	0.27	+0.3
124,810	-	ylaC	NOLOHH_01160	0.27	+1.1
124,888	+	ylaC	NOLOHH_01160	0.44	-0.2
124,888	+	ylaC	NOLOHH_01160	0.44	-0.5
124,893	-	ylaC	NOLOHH_01160	0.45	+2.1
124,901	+	ylaC	NOLOHH_01160	0.46	+0.6
124,926	+	ylaC	NOLOHH_01160	0.52	-0.3
124,978	-	ylaC	NOLOHH_01160	0.63	+0.2
125,123	+				+1.8
125,151	+				+0.7
125,152	-				+0.3
125,162	+				-1.5
125,162	+				+0.1
125,163	-				+1.1
125,167	-				+0.5
125,232	+				-0.0
125,233	-				-1.7
125,233	-				-0.2
125,233	-				-0.5
125,282	+				-0.3
125,282	+				-0.0
125,282	+				+1.1
125,282	+				+1.8
125,283	-				+0.6
125,283	-				+0.3
125,283	-				+0.6
125,304	+				-0.8
125,304	+				+0.1
125,310	+				+0.5
125,311	-				-0.5
125,311	-				+1.1
125,343	+				-1.5
125,414	+				+0.8
125,446	+				-1.7
125,446	+				-0.7
125,447	-				-0.3
125,447	-				+1.9
125,476	-	pdeB	NOLOHH_01165	0.10	-0.9
125,575	+	pdeB	NOLOHH_01165	0.17	+0.4
125,582	-	pdeB	NOLOHH_01165	0.17	-0.8
125,605	+	pdeB	NOLOHH_01165	0.19	+0.3
125,662	-	pdeB	NOLOHH_01165	0.22	+2.4
125,662	-	pdeB	NOLOHH_01165	0.22	-0.9
125,744	-	pdeB	NOLOHH_01165	0.28	+1.7
125,744	-	pdeB	NOLOHH_01165	0.28	+0.2
125,771	-	pdeB	NOLOHH_01165	0.29	+0.8
125,771	-	pdeB	NOLOHH_01165	0.29	-0.6
125,771	-	pdeB	NOLOHH_01165	0.29	-1.1
125,800	-	pdeB	NOLOHH_01165	0.31	+0.7
125,817	+	pdeB	NOLOHH_01165	0.32	-0.8
125,901	+	pdeB	NOLOHH_01165	0.38	+0.5
125,902	-	pdeB	NOLOHH_01165	0.38	-1.5
125,913	-	pdeB	NOLOHH_01165	0.38	+0.4
125,986	-	pdeB	NOLOHH_01165	0.43	-0.8
125,986	-	pdeB	NOLOHH_01165	0.43	+0.9
126,165	+	pdeB	NOLOHH_01165	0.55	-1.1
126,256	-	pdeB	NOLOHH_01165	0.61	+1.5
126,331	-	pdeB	NOLOHH_01165	0.65	+0.2
126,333	-	pdeB	NOLOHH_01165	0.66	-0.3
126,352	-	pdeB	NOLOHH_01165	0.67	-1.6
126,609	-	pdeB	NOLOHH_01165	0.83	-1.5
126,613	+	pdeB	NOLOHH_01165	0.84	+0.7
126,614	-	pdeB	NOLOHH_01165	0.84	-0.7
126,618	-	pdeB	NOLOHH_01165	0.84	+1.1
126,811	+				-0.6
126,812	+				+0.7
126,812	-				+1.9
126,910	+				+2.3
126,910	+				+0.9
126,911	-				+0.4
126,911	-				-2.0
126,940	+				+0.7
127,173	-	ybaA	NOLOHH_01170	0.75	-0.6
127,256	-				-1.6
127,256	-				-0.0
127,256	-				-0.5
127,256	-				-0.4
127,256	-				+0.7
127,256	-				+1.4
127,256	-				-2.1
127,256	-				+0.5
127,256	-				-0.6
127,270	-				-1.0
127,270	-				+1.2
127,270	-				+2.3
127,270	-				-0.6
127,270	-				-0.4
127,282	+				-1.4
127,283	-				-0.2
127,612	-				-0.4
127,612	-				-0.2
127,612	-				-0.1
127,612	-				+0.1
127,624	+				-0.8
127,692	-	atl	NOLOHH_01180	0.16	+1.1
127,705	-	atl	NOLOHH_01180	0.21	+0.5
127,705	-	atl	NOLOHH_01180	0.21	-0.3
127,716	+	atl	NOLOHH_01180	0.24	+1.6
127,716	+	atl	NOLOHH_01180	0.24	+0.0
127,861	+	atl	NOLOHH_01180	0.71	-2.0
127,861	+	atl	NOLOHH_01180	0.71	+0.2