Strain Fitness in Escherichia coli ECRC62 around BNILDI_20300

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
4,080,646	+				+0.2
4,080,646	+				+1.8
4,080,647	-				+1.4
4,080,650	+				+0.0
4,080,651	-				+0.1
4,080,858	-	ycaL	BNILDI_20295	0.28	-0.0
4,080,860	+	ycaL	BNILDI_20295	0.28	+0.1
4,081,064	-	ycaL	BNILDI_20295	0.55	+2.1
4,081,115	+	ycaL	BNILDI_20295	0.61	+1.4
4,081,117	+	ycaL	BNILDI_20295	0.62	-0.1
4,081,117	+	ycaL	BNILDI_20295	0.62	+0.5
4,081,117	+	ycaL	BNILDI_20295	0.62	+0.4
4,081,118	-	ycaL	BNILDI_20295	0.62	+0.1
4,081,126	+	ycaL	BNILDI_20295	0.63	-1.5
4,081,126	+	ycaL	BNILDI_20295	0.63	+0.0
4,081,127	-	ycaL	BNILDI_20295	0.63	+0.0
4,081,127	-	ycaL	BNILDI_20295	0.63	+0.3
4,081,127	-	ycaL	BNILDI_20295	0.63	-0.9
4,081,127	-	ycaL	BNILDI_20295	0.63	-3.9
4,081,148	+	ycaL	BNILDI_20295	0.66	+0.1
4,081,279	-	ycaL	BNILDI_20295	0.83	+0.6
4,081,292	+	ycaL	BNILDI_20295	0.85	+0.5
4,081,293	-	ycaL	BNILDI_20295	0.85	-0.9
4,081,303	-	ycaL	BNILDI_20295	0.86	+0.4
4,081,433	+				-0.7
4,081,561	+				+0.1
4,081,593	-				-1.2
4,081,616	-				-3.3
4,081,667	+				-2.5
4,081,667	+				-5.7
4,081,668	-				-1.2
4,081,717	+	aroA	BNILDI_20300	0.11	-3.5
4,081,717	+	aroA	BNILDI_20300	0.11	-3.8
4,081,718	-	aroA	BNILDI_20300	0.11	-3.0
4,081,859	-	aroA	BNILDI_20300	0.22	-2.7
4,081,859	-	aroA	BNILDI_20300	0.22	-4.4
4,081,863	-	aroA	BNILDI_20300	0.22	-3.3
4,081,863	-	aroA	BNILDI_20300	0.22	-4.4
4,081,894	-	aroA	BNILDI_20300	0.25	-1.8
4,081,894	-	aroA	BNILDI_20300	0.25	-5.1
4,081,940	+	aroA	BNILDI_20300	0.28	-4.8
4,081,982	+	aroA	BNILDI_20300	0.31	-3.6
4,081,982	+	aroA	BNILDI_20300	0.31	-3.6
4,081,983	-	aroA	BNILDI_20300	0.32	-3.0
4,081,983	-	aroA	BNILDI_20300	0.32	-3.7
4,082,054	+	aroA	BNILDI_20300	0.37	-3.0
4,082,054	+	aroA	BNILDI_20300	0.37	-3.5
4,082,060	+	aroA	BNILDI_20300	0.38	-1.9
4,082,061	-	aroA	BNILDI_20300	0.38	-5.2
4,082,083	-	aroA	BNILDI_20300	0.39	-2.4
4,082,152	+	aroA	BNILDI_20300	0.45	-3.1
4,082,152	+	aroA	BNILDI_20300	0.45	-5.7
4,082,263	+	aroA	BNILDI_20300	0.53	-4.0
4,082,264	-	aroA	BNILDI_20300	0.53	-3.1
4,082,264	-	aroA	BNILDI_20300	0.53	+0.4
4,082,271	-	aroA	BNILDI_20300	0.54	-4.1
4,082,271	-	aroA	BNILDI_20300	0.54	+0.4
4,082,304	-	aroA	BNILDI_20300	0.57	-2.9
4,082,616	+	aroA	BNILDI_20300	0.81	-4.2
4,082,617	-	aroA	BNILDI_20300	0.81	-2.4
4,082,652	-	aroA	BNILDI_20300	0.84	-2.2
4,082,670	-	aroA	BNILDI_20300	0.85	-5.3
4,082,670	-	aroA	BNILDI_20300	0.85	-4.0
4,082,671	+	aroA	BNILDI_20300	0.85	-3.6
4,082,671	+	aroA	BNILDI_20300	0.85	-3.3
4,082,672	-	aroA	BNILDI_20300	0.85	-0.4
4,082,742	+				-4.9
4,082,743	-				-3.8
4,082,761	-				-3.7
4,082,775	+				-2.7
4,082,776	-				-2.1
4,082,814	-				-2.2
4,082,816	+				-1.0
4,082,844	+				-3.1
4,083,004	-				-2.6
4,083,010	-				-4.4
4,083,010	-				-5.4
4,083,177	+	serC	BNILDI_20305	0.22	-5.0
4,083,177	+	serC	BNILDI_20305	0.22	-6.0
4,083,193	+	serC	BNILDI_20305	0.24	-2.0
4,083,278	-	serC	BNILDI_20305	0.32	-1.2
4,083,281	+	serC	BNILDI_20305	0.32	-3.2
4,083,282	-	serC	BNILDI_20305	0.32	-5.0
4,083,282	-	serC	BNILDI_20305	0.32	-2.0
4,083,339	-	serC	BNILDI_20305	0.37	-5.7
4,083,586	-	serC	BNILDI_20305	0.60	-2.4
4,083,672	+	serC	BNILDI_20305	0.68	-4.9
4,083,734	+	serC	BNILDI_20305	0.74	-1.6
4,083,751	-	serC	BNILDI_20305	0.75	-4.2
4,083,762	+	serC	BNILDI_20305	0.76	-1.8
4,083,811	+	serC	BNILDI_20305	0.81	-3.3
4,083,814	+	serC	BNILDI_20305	0.81	-1.5
4,083,815	-	serC	BNILDI_20305	0.81	-2.3
4,083,837	+	serC	BNILDI_20305	0.83	-5.6