Strain Fitness in Escherichia coli ECRC62 around BNILDI_19085

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,834,848	-				+0.3
3,834,848	-				-2.2
3,834,869	-				+1.4
3,834,873	-				+0.2
3,834,888	-				+0.3
3,834,895	+				+1.7
3,834,905	-				-0.0
3,834,909	+				-0.7
3,834,915	-				-1.9
3,834,975	+				+0.2
3,834,975	+				+0.2
3,834,989	-				+0.0
3,835,055	+	phoP	BNILDI_19080	0.17	+0.9
3,835,141	+	phoP	BNILDI_19080	0.30	-0.3
3,835,213	-	phoP	BNILDI_19080	0.40	+1.1
3,835,213	-	phoP	BNILDI_19080	0.40	+1.3
3,835,232	+	phoP	BNILDI_19080	0.43	-0.1
3,835,362	+	phoP	BNILDI_19080	0.63	-0.9
3,835,362	+	phoP	BNILDI_19080	0.63	-1.6
3,835,504	+	phoP	BNILDI_19080	0.84	+0.4
3,835,504	+	phoP	BNILDI_19080	0.84	+1.0
3,835,515	+	phoP	BNILDI_19080	0.85	-0.1
3,835,515	+	phoP	BNILDI_19080	0.85	-0.1
3,835,516	-	phoP	BNILDI_19080	0.86	-0.2
3,835,570	+				+0.0
3,835,574	-				+0.5
3,835,623	-				+0.2
3,835,731	+				+0.2
3,835,732	-				+0.1
3,835,732	-				-0.2
3,835,789	+	phoQ	BNILDI_19085	0.12	+0.5
3,835,791	+	phoQ	BNILDI_19085	0.12	+0.4
3,835,791	+	phoQ	BNILDI_19085	0.12	-0.6
3,836,176	+	phoQ	BNILDI_19085	0.39	-1.0
3,836,176	+	phoQ	BNILDI_19085	0.39	-0.9
3,836,196	+	phoQ	BNILDI_19085	0.40	+0.6
3,836,196	+	phoQ	BNILDI_19085	0.40	+0.0
3,836,196	+	phoQ	BNILDI_19085	0.40	-0.5
3,836,200	+	phoQ	BNILDI_19085	0.40	+0.6
3,836,200	+	phoQ	BNILDI_19085	0.40	+0.5
3,836,204	+	phoQ	BNILDI_19085	0.41	-0.0
3,836,205	-	phoQ	BNILDI_19085	0.41	-0.9
3,836,414	-	phoQ	BNILDI_19085	0.55	+0.5
3,836,419	-	phoQ	BNILDI_19085	0.55	+0.1
3,836,443	-	phoQ	BNILDI_19085	0.57	-2.5
3,836,475	+	phoQ	BNILDI_19085	0.59	-0.9
3,836,569	+	phoQ	BNILDI_19085	0.66	-0.1
3,836,572	+	phoQ	BNILDI_19085	0.66	+1.2
3,836,573	-	phoQ	BNILDI_19085	0.66	+1.3
3,836,675	-	phoQ	BNILDI_19085	0.73	-0.2
3,836,694	+	phoQ	BNILDI_19085	0.74	+1.4
3,836,695	-	phoQ	BNILDI_19085	0.74	-1.9
3,836,695	-	phoQ	BNILDI_19085	0.74	-0.1
3,836,785	-	phoQ	BNILDI_19085	0.80	+0.5
3,836,840	-	phoQ	BNILDI_19085	0.84	+0.0
3,836,840	-	phoQ	BNILDI_19085	0.84	+2.2
3,836,840	-	phoQ	BNILDI_19085	0.84	+0.1
3,836,840	-	phoQ	BNILDI_19085	0.84	+0.3
3,836,840	-	phoQ	BNILDI_19085	0.84	+0.8
3,836,840	-	phoQ	BNILDI_19085	0.84	+0.4
3,836,841	+	phoQ	BNILDI_19085	0.84	+0.3
3,836,842	-	phoQ	BNILDI_19085	0.84	-0.0
3,836,842	-	phoQ	BNILDI_19085	0.84	+0.1
3,836,842	-	phoQ	BNILDI_19085	0.84	+0.0
3,836,842	-	phoQ	BNILDI_19085	0.84	+0.2
3,836,868	+	phoQ	BNILDI_19085	0.86	-0.0
3,836,919	+	phoQ	BNILDI_19085	0.89	-1.7
3,836,942	+				+0.2
3,836,943	-				-0.2
3,836,978	-				-0.2
3,836,978	-				+1.1
3,836,978	-				+1.1
3,836,985	+				+0.8
3,837,074	+				+1.1
3,837,082	+				+1.7
3,837,111	-				-0.0
3,837,113	-				-0.8
3,837,154	+				-0.4
3,837,232	-				-0.6
3,837,235	-				+1.0
3,837,358	+	roxA	BNILDI_19090	0.19	-0.3
3,837,455	+	roxA	BNILDI_19090	0.27	+1.9
3,837,468	+	roxA	BNILDI_19090	0.29	-0.1
3,837,532	+	roxA	BNILDI_19090	0.34	+0.7
3,837,532	+	roxA	BNILDI_19090	0.34	-0.9
3,837,544	-	roxA	BNILDI_19090	0.35	-2.2
3,837,687	+	roxA	BNILDI_19090	0.48	-0.0
3,837,776	+	roxA	BNILDI_19090	0.56	+0.5
3,837,777	-	roxA	BNILDI_19090	0.56	+0.3
3,837,796	+	roxA	BNILDI_19090	0.58	+0.3
3,837,826	+	roxA	BNILDI_19090	0.60	-0.8
3,837,940	-	roxA	BNILDI_19090	0.71	+0.7