Strain Fitness in Escherichia coli ECRC62 around BNILDI_08660

Experiment: L-Arabinose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntftsA and ftsZ are separated by 60 nucleotidesftsZ and lpxC are separated by 100 nucleotides BNILDI_08650: ftsA - cell division protein FtsA, at 1,733,190 to 1,734,452 ftsA BNILDI_08660: ftsZ - cell division protein FtsZ, at 1,734,513 to 1,735,664 ftsZ BNILDI_08665: lpxC - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 1,735,765 to 1,736,682 lpxC Position (kb) 1734 1735 1736Strain fitness (log2 ratio) -1 0 1 2at 1735.726 kb on + strandat 1735.726 kb on + strandat 1735.741 kb on + strandat 1735.745 kb on + strandat 1735.745 kb on + strandat 1735.745 kb on + strandat 1735.758 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arabinose
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1,735,726 + +2.1
1,735,726 + +0.1
1,735,741 + -1.4
1,735,745 + -0.3
1,735,745 + +0.2
1,735,745 + +0.1
1,735,758 + -0.6

Or see this region's nucleotide sequence