Strain Fitness in Escherichia coli ECRC62 around BNILDI_08565

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,713,913	+	leuO	BNILDI_08560	0.36	+0.1
1,713,913	+	leuO	BNILDI_08560	0.36	-2.4
1,713,914	-	leuO	BNILDI_08560	0.36	+1.3
1,713,997	+	leuO	BNILDI_08560	0.45	-1.8
1,713,997	+	leuO	BNILDI_08560	0.45	+0.2
1,713,998	-	leuO	BNILDI_08560	0.45	-0.3
1,714,004	+	leuO	BNILDI_08560	0.45	+0.4
1,714,004	+	leuO	BNILDI_08560	0.45	+0.8
1,714,004	+	leuO	BNILDI_08560	0.45	-0.1
1,714,005	-	leuO	BNILDI_08560	0.45	-0.5
1,714,005	-	leuO	BNILDI_08560	0.45	+0.5
1,714,073	+	leuO	BNILDI_08560	0.53	-1.3
1,714,074	-	leuO	BNILDI_08560	0.53	-0.5
1,714,195	-	leuO	BNILDI_08560	0.66	-0.1
1,714,241	+	leuO	BNILDI_08560	0.70	-1.0
1,714,242	-	leuO	BNILDI_08560	0.70	-2.4
1,714,255	-	leuO	BNILDI_08560	0.72	-0.2
1,714,264	+	leuO	BNILDI_08560	0.73	+0.5
1,714,269	-	leuO	BNILDI_08560	0.73	+1.8
1,714,312	+	leuO	BNILDI_08560	0.78	+0.5
1,714,313	-	leuO	BNILDI_08560	0.78	-0.5
1,714,346	+	leuO	BNILDI_08560	0.81	-1.3
1,714,393	+	leuO	BNILDI_08560	0.86	+0.3
1,714,394	-	leuO	BNILDI_08560	0.87	-1.2
1,714,400	-	leuO	BNILDI_08560	0.87	-0.9
1,714,498	+				-0.6
1,714,499	-				+1.4
1,714,615	+				-0.4
1,714,671	-				+0.7
1,714,705	-				-0.0
1,714,733	+				+0.0
1,714,739	+				+0.9
1,714,903	-				+0.3
1,714,934	-				-0.1
1,714,937	+				+1.3
1,714,937	+				-0.7
1,714,938	-				+0.9
1,714,951	+				-0.5
1,714,951	+				+0.2
1,714,964	-				+0.2
1,714,974	+				+0.3
1,714,975	-				-0.4
1,714,975	-				-0.1
1,714,975	-				+0.8
1,714,975	-				+0.2
1,714,977	+				-0.0
1,714,977	+				-0.3
1,714,977	+				+0.3
1,714,977	+				+1.8
1,714,978	-				+1.9
1,715,005	+				-0.0
1,715,105	+	ilvI	BNILDI_08565	0.15	+0.6
1,715,106	-	ilvI	BNILDI_08565	0.16	-0.8
1,715,106	-	ilvI	BNILDI_08565	0.16	+0.7
1,715,124	+	ilvI	BNILDI_08565	0.17	+0.6
1,715,124	+	ilvI	BNILDI_08565	0.17	-0.9
1,715,124	+	ilvI	BNILDI_08565	0.17	+1.0
1,715,125	-	ilvI	BNILDI_08565	0.17	+0.3
1,715,125	-	ilvI	BNILDI_08565	0.17	+0.3
1,715,160	+	ilvI	BNILDI_08565	0.19	-0.1
1,715,160	+	ilvI	BNILDI_08565	0.19	-0.5
1,715,161	-	ilvI	BNILDI_08565	0.19	+0.2
1,715,358	-	ilvI	BNILDI_08565	0.30	+0.3
1,715,381	-	ilvI	BNILDI_08565	0.31	-3.2
1,715,390	+	ilvI	BNILDI_08565	0.32	-1.0
1,715,390	+	ilvI	BNILDI_08565	0.32	-0.5
1,715,391	-	ilvI	BNILDI_08565	0.32	+0.6
1,715,402	-	ilvI	BNILDI_08565	0.33	+0.4
1,715,413	+	ilvI	BNILDI_08565	0.33	-0.3
1,715,414	-	ilvI	BNILDI_08565	0.33	+0.4
1,715,471	+	ilvI	BNILDI_08565	0.37	-0.5
1,715,476	-	ilvI	BNILDI_08565	0.37	-0.4
1,715,639	-	ilvI	BNILDI_08565	0.46	-2.0
1,715,639	-	ilvI	BNILDI_08565	0.46	+0.3
1,715,717	+	ilvI	BNILDI_08565	0.51	-2.5
1,715,718	-	ilvI	BNILDI_08565	0.51	+1.9
1,715,718	-	ilvI	BNILDI_08565	0.51	-0.0
1,715,759	-	ilvI	BNILDI_08565	0.53	+0.9
1,715,771	-	ilvI	BNILDI_08565	0.54	-0.0
1,715,930	+	ilvI	BNILDI_08565	0.63	+0.3
1,715,930	+	ilvI	BNILDI_08565	0.63	-0.2
1,715,931	-	ilvI	BNILDI_08565	0.63	-0.8
1,716,005	+	ilvI	BNILDI_08565	0.68	-1.3
1,716,006	-	ilvI	BNILDI_08565	0.68	+0.4
1,716,006	-	ilvI	BNILDI_08565	0.68	-1.0
1,716,050	+	ilvI	BNILDI_08565	0.70	+0.1
1,716,188	-	ilvI	BNILDI_08565	0.78	-0.0
1,716,228	-	ilvI	BNILDI_08565	0.81	+0.1
1,716,302	+	ilvI	BNILDI_08565	0.85	+0.1
1,716,303	-	ilvI	BNILDI_08565	0.85	+0.0
1,716,303	-	ilvI	BNILDI_08565	0.85	+0.5
1,716,327	-	ilvI	BNILDI_08565	0.86	-0.0
1,716,327	-	ilvI	BNILDI_08565	0.86	-0.6
1,716,327	-	ilvI	BNILDI_08565	0.86	-0.1
1,716,327	-	ilvI	BNILDI_08565	0.86	+0.3
1,716,327	-	ilvI	BNILDI_08565	0.86	+0.0
1,716,327	-	ilvI	BNILDI_08565	0.86	+1.3
1,716,327	-	ilvI	BNILDI_08565	0.86	+1.4
1,716,328	+	ilvI	BNILDI_08565	0.86	-1.1
1,716,328	+	ilvI	BNILDI_08565	0.86	+0.3
1,716,328	+	ilvI	BNILDI_08565	0.86	+0.5
1,716,328	+	ilvI	BNILDI_08565	0.86	-0.6
1,716,328	+	ilvI	BNILDI_08565	0.86	-0.3
1,716,329	-	ilvI	BNILDI_08565	0.86	+0.1
1,716,368	+	ilvI	BNILDI_08565	0.89	-0.5
1,716,369	-	ilvI	BNILDI_08565	0.89	-0.6
1,716,565	-				-0.6
1,716,578	+				-0.2
1,716,699	+	ilvN	BNILDI_08570	0.27	-0.9
1,716,700	-	ilvN	BNILDI_08570	0.27	-1.7
1,716,755	+	ilvN	BNILDI_08570	0.39	-1.3
1,716,756	-	ilvN	BNILDI_08570	0.39	-1.8
1,716,873	+	ilvN	BNILDI_08570	0.63	-0.8
1,716,874	-	ilvN	BNILDI_08570	0.63	-0.1
1,716,884	+	ilvN	BNILDI_08570	0.65	+0.2
1,716,923	-	ilvN	BNILDI_08570	0.73	+1.8
1,716,936	-	ilvN	BNILDI_08570	0.75	-0.1
1,716,952	-	ilvN	BNILDI_08570	0.79	-0.1
1,717,046	+				-0.5
1,717,133	+	fruL	BNILDI_08575	0.67	+0.5
1,717,134	-	fruL	BNILDI_08575	0.68	-0.5
1,717,167	-				-0.6
1,717,167	-				-0.7
1,717,196	-				-2.5
1,717,220	+				-0.3
1,717,290	+				-0.4
1,717,290	+				-2.0
1,717,290	+				-1.0
1,717,290	+				-3.0
1,717,290	+				-0.6
1,717,291	-				-0.1
1,717,295	+				-0.7
1,717,295	+				-1.7
1,717,296	-				+0.0
1,717,461	+	cra	BNILDI_08580	0.22	-1.0
1,717,462	-	cra	BNILDI_08580	0.22	-0.3
1,717,479	+	cra	BNILDI_08580	0.24	-0.3
1,717,480	-	cra	BNILDI_08580	0.24	-2.5
1,717,519	+	cra	BNILDI_08580	0.28	+1.2