Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tusB and tusC are separated by 7 nucleotides tusC and tusD overlap by 1 nucleotides tusD and yheO overlap by 1 nucleotides yheO and fkpA are separated by 166 nucleotides
BNILDI_02405: tusB - sulfurtransferase complex subunit TusB, at 456,649 to 456,936
tusB
BNILDI_02410: tusC - sulfurtransferase complex subunit TusC, at 456,944 to 457,303
tusC
BNILDI_02415: tusD - sulfurtransferase complex subunit TusD, at 457,303 to 457,689
tusD
BNILDI_02420: yheO - Uncharacterized protein YheO, at 457,689 to 458,411
yheO
BNILDI_02425: fkpA - FKBP-type peptidyl-prolyl cis-trans isomerase, at 458,578 to 459,390
fkpA
Position (kb) 457
458
459 Strain fitness (log2 ratio) -2
-1
0
1
2 at 456.937 kb on - strand at 457.691 kb on - strand at 457.736 kb on - strand at 457.742 kb on - strand at 457.742 kb on - strand at 457.742 kb on - strand at 457.854 kb on - strand, within yheO at 458.041 kb on - strand, within yheO at 458.086 kb on - strand, within yheO at 458.086 kb on - strand, within yheO at 458.114 kb on - strand, within yheO at 458.205 kb on - strand, within yheO at 458.205 kb on - strand, within yheO at 458.242 kb on - strand, within yheO at 458.318 kb on - strand, within yheO at 458.484 kb on - strand at 458.518 kb on + strand at 458.518 kb on + strand at 458.522 kb on + strand at 458.522 kb on + strand at 458.523 kb on - strand at 458.539 kb on - strand at 458.539 kb on - strand at 458.572 kb on + strand at 458.572 kb on + strand at 458.662 kb on + strand, within fkpA at 458.679 kb on + strand, within fkpA at 458.680 kb on - strand, within fkpA at 458.871 kb on + strand, within fkpA at 458.872 kb on - strand, within fkpA at 458.879 kb on + strand, within fkpA at 458.880 kb on - strand, within fkpA at 458.880 kb on - strand, within fkpA at 458.880 kb on - strand, within fkpA at 458.932 kb on + strand, within fkpA at 458.932 kb on + strand, within fkpA at 458.933 kb on - strand, within fkpA at 458.933 kb on - strand, within fkpA at 458.935 kb on + strand, within fkpA at 458.936 kb on - strand, within fkpA at 458.942 kb on + strand, within fkpA at 458.999 kb on + strand, within fkpA at 459.124 kb on - strand, within fkpA at 459.216 kb on - strand, within fkpA at 459.376 kb on - strand at 459.394 kb on + strand at 459.394 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 456,937 - -1.6 457,691 - +0.5 457,736 - +1.7 457,742 - +2.3 457,742 - +0.3 457,742 - +0.6 457,854 - yheO BNILDI_02420 0.23 -1.0 458,041 - yheO BNILDI_02420 0.49 +2.2 458,086 - yheO BNILDI_02420 0.55 +1.0 458,086 - yheO BNILDI_02420 0.55 +0.1 458,114 - yheO BNILDI_02420 0.59 +0.0 458,205 - yheO BNILDI_02420 0.71 +0.1 458,205 - yheO BNILDI_02420 0.71 +1.6 458,242 - yheO BNILDI_02420 0.76 +0.0 458,318 - yheO BNILDI_02420 0.87 +0.9 458,484 - +0.2 458,518 + +0.3 458,518 + -0.3 458,522 + -1.1 458,522 + +1.0 458,523 - +0.1 458,539 - -0.3 458,539 - +1.1 458,572 + +0.4 458,572 + +0.2 458,662 + fkpA BNILDI_02425 0.10 -0.7 458,679 + fkpA BNILDI_02425 0.12 +2.7 458,680 - fkpA BNILDI_02425 0.13 -1.6 458,871 + fkpA BNILDI_02425 0.36 +1.0 458,872 - fkpA BNILDI_02425 0.36 -0.2 458,879 + fkpA BNILDI_02425 0.37 +0.1 458,880 - fkpA BNILDI_02425 0.37 +1.0 458,880 - fkpA BNILDI_02425 0.37 -1.0 458,880 - fkpA BNILDI_02425 0.37 -1.9 458,932 + fkpA BNILDI_02425 0.44 -0.6 458,932 + fkpA BNILDI_02425 0.44 +1.1 458,933 - fkpA BNILDI_02425 0.44 +0.3 458,933 - fkpA BNILDI_02425 0.44 -1.5 458,935 + fkpA BNILDI_02425 0.44 +1.6 458,936 - fkpA BNILDI_02425 0.44 -0.3 458,942 + fkpA BNILDI_02425 0.45 +0.8 458,999 + fkpA BNILDI_02425 0.52 +0.3 459,124 - fkpA BNILDI_02425 0.67 +0.8 459,216 - fkpA BNILDI_02425 0.78 +0.3 459,376 - +0.1 459,394 + +0.4 459,394 + -1.8
Or see this region's nucleotide sequence