Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mlaC and mlaD are separated by 18 nucleotides mlaD and mlaE are separated by 4 nucleotides mlaE and mlaF are separated by 7 nucleotides
BNILDI_01745: mlaC - phospholipid-binding protein MlaC, at 341,630 to 342,265
mlaC
BNILDI_01750: mlaD - outer membrane lipid asymmetry maintenance protein MlaD, at 342,284 to 342,835
mlaD
BNILDI_01755: mlaE - lipid asymmetry maintenance ABC transporter permease subunit MlaE, at 342,840 to 343,622
mlaE
BNILDI_01760: mlaF - phospholipid ABC transporter ATP-binding protein MlaF, at 343,630 to 344,439
mlaF
Position (kb) 342
343
344 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 341.854 kb on + strand, within mlaC at 341.931 kb on + strand, within mlaC at 341.932 kb on - strand, within mlaC at 341.932 kb on - strand, within mlaC at 341.932 kb on - strand, within mlaC at 341.967 kb on + strand, within mlaC at 342.024 kb on + strand, within mlaC at 342.024 kb on + strand, within mlaC at 342.062 kb on + strand, within mlaC at 342.062 kb on + strand, within mlaC at 342.062 kb on + strand, within mlaC at 342.062 kb on + strand, within mlaC at 342.062 kb on + strand, within mlaC at 342.063 kb on - strand, within mlaC at 342.066 kb on + strand, within mlaC at 342.067 kb on - strand, within mlaC at 342.102 kb on + strand, within mlaC at 342.181 kb on + strand, within mlaC at 342.285 kb on + strand at 342.322 kb on + strand at 342.352 kb on + strand, within mlaD at 342.353 kb on - strand, within mlaD at 342.353 kb on - strand, within mlaD at 342.358 kb on + strand, within mlaD at 342.358 kb on + strand, within mlaD at 342.359 kb on - strand, within mlaD at 342.424 kb on + strand, within mlaD at 342.424 kb on + strand, within mlaD at 342.425 kb on - strand, within mlaD at 342.425 kb on - strand, within mlaD at 342.425 kb on - strand, within mlaD at 342.439 kb on + strand, within mlaD at 342.504 kb on + strand, within mlaD at 342.505 kb on - strand, within mlaD at 342.505 kb on - strand, within mlaD at 342.530 kb on - strand, within mlaD at 342.551 kb on - strand, within mlaD at 342.568 kb on - strand, within mlaD at 342.603 kb on + strand, within mlaD at 342.604 kb on - strand, within mlaD at 342.623 kb on - strand, within mlaD at 342.658 kb on + strand, within mlaD at 342.731 kb on - strand, within mlaD at 342.735 kb on - strand, within mlaD at 342.735 kb on - strand, within mlaD at 342.735 kb on - strand, within mlaD at 343.010 kb on + strand, within mlaE at 343.011 kb on - strand, within mlaE at 343.142 kb on + strand, within mlaE at 343.167 kb on - strand, within mlaE at 343.379 kb on + strand, within mlaE at 343.381 kb on + strand, within mlaE at 343.381 kb on + strand, within mlaE at 343.381 kb on + strand, within mlaE at 343.382 kb on - strand, within mlaE at 343.382 kb on - strand, within mlaE at 343.448 kb on + strand, within mlaE at 343.449 kb on - strand, within mlaE at 343.477 kb on + strand, within mlaE at 343.477 kb on + strand, within mlaE at 343.477 kb on + strand, within mlaE at 343.543 kb on - strand, within mlaE at 343.581 kb on - strand at 343.589 kb on + strand at 343.614 kb on + strand at 343.614 kb on + strand at 343.614 kb on + strand at 343.614 kb on + strand at 343.643 kb on - strand at 343.809 kb on + strand, within mlaF at 344.021 kb on - strand, within mlaF at 344.070 kb on + strand, within mlaF at 344.070 kb on + strand, within mlaF at 344.071 kb on - strand, within mlaF at 344.071 kb on - strand, within mlaF at 344.100 kb on + strand, within mlaF at 344.134 kb on + strand, within mlaF at 344.134 kb on + strand, within mlaF at 344.135 kb on - strand, within mlaF at 344.135 kb on - strand, within mlaF at 344.142 kb on + strand, within mlaF at 344.142 kb on + strand, within mlaF at 344.196 kb on + strand, within mlaF at 344.196 kb on + strand, within mlaF at 344.197 kb on - strand, within mlaF at 344.197 kb on - strand, within mlaF at 344.197 kb on - strand, within mlaF at 344.197 kb on - strand, within mlaF at 344.199 kb on - strand, within mlaF at 344.226 kb on + strand, within mlaF at 344.291 kb on - strand, within mlaF at 344.302 kb on - strand, within mlaF at 344.362 kb on - strand at 344.391 kb on + strand at 344.439 kb on + strand at 344.440 kb on - strand at 344.470 kb on - strand at 344.504 kb on + strand at 344.504 kb on + strand at 344.505 kb on - strand at 344.505 kb on - strand at 344.505 kb on - strand at 344.505 kb on - strand at 344.508 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 341,854 + mlaC BNILDI_01745 0.35 +2.1 341,931 + mlaC BNILDI_01745 0.47 -0.7 341,932 - mlaC BNILDI_01745 0.47 +0.2 341,932 - mlaC BNILDI_01745 0.47 -0.6 341,932 - mlaC BNILDI_01745 0.47 +1.0 341,967 + mlaC BNILDI_01745 0.53 +0.9 342,024 + mlaC BNILDI_01745 0.62 +1.8 342,024 + mlaC BNILDI_01745 0.62 -1.0 342,062 + mlaC BNILDI_01745 0.68 -0.4 342,062 + mlaC BNILDI_01745 0.68 +0.0 342,062 + mlaC BNILDI_01745 0.68 +1.1 342,062 + mlaC BNILDI_01745 0.68 +0.8 342,062 + mlaC BNILDI_01745 0.68 -0.0 342,063 - mlaC BNILDI_01745 0.68 -1.0 342,066 + mlaC BNILDI_01745 0.69 +0.1 342,067 - mlaC BNILDI_01745 0.69 -0.2 342,102 + mlaC BNILDI_01745 0.74 +0.4 342,181 + mlaC BNILDI_01745 0.87 -0.7 342,285 + +0.2 342,322 + +0.0 342,352 + mlaD BNILDI_01750 0.12 -0.5 342,353 - mlaD BNILDI_01750 0.12 -1.1 342,353 - mlaD BNILDI_01750 0.12 -0.1 342,358 + mlaD BNILDI_01750 0.13 +1.1 342,358 + mlaD BNILDI_01750 0.13 +0.3 342,359 - mlaD BNILDI_01750 0.14 +1.9 342,424 + mlaD BNILDI_01750 0.25 +0.2 342,424 + mlaD BNILDI_01750 0.25 -0.4 342,425 - mlaD BNILDI_01750 0.26 -0.4 342,425 - mlaD BNILDI_01750 0.26 +0.1 342,425 - mlaD BNILDI_01750 0.26 +0.5 342,439 + mlaD BNILDI_01750 0.28 -0.8 342,504 + mlaD BNILDI_01750 0.40 -0.8 342,505 - mlaD BNILDI_01750 0.40 +0.4 342,505 - mlaD BNILDI_01750 0.40 -0.9 342,530 - mlaD BNILDI_01750 0.45 -0.7 342,551 - mlaD BNILDI_01750 0.48 +0.2 342,568 - mlaD BNILDI_01750 0.51 -2.6 342,603 + mlaD BNILDI_01750 0.58 +1.6 342,604 - mlaD BNILDI_01750 0.58 +0.0 342,623 - mlaD BNILDI_01750 0.61 -3.7 342,658 + mlaD BNILDI_01750 0.68 -0.3 342,731 - mlaD BNILDI_01750 0.81 -1.1 342,735 - mlaD BNILDI_01750 0.82 -0.8 342,735 - mlaD BNILDI_01750 0.82 -0.4 342,735 - mlaD BNILDI_01750 0.82 -0.7 343,010 + mlaE BNILDI_01755 0.22 +0.1 343,011 - mlaE BNILDI_01755 0.22 -3.0 343,142 + mlaE BNILDI_01755 0.39 +0.4 343,167 - mlaE BNILDI_01755 0.42 -0.3 343,379 + mlaE BNILDI_01755 0.69 -0.1 343,381 + mlaE BNILDI_01755 0.69 +0.8 343,381 + mlaE BNILDI_01755 0.69 +0.8 343,381 + mlaE BNILDI_01755 0.69 -0.2 343,382 - mlaE BNILDI_01755 0.69 +0.1 343,382 - mlaE BNILDI_01755 0.69 -1.5 343,448 + mlaE BNILDI_01755 0.78 -0.1 343,449 - mlaE BNILDI_01755 0.78 -0.5 343,477 + mlaE BNILDI_01755 0.81 +0.4 343,477 + mlaE BNILDI_01755 0.81 -0.7 343,477 + mlaE BNILDI_01755 0.81 -0.2 343,543 - mlaE BNILDI_01755 0.90 +0.4 343,581 - -2.9 343,589 + -1.7 343,614 + -0.5 343,614 + +1.5 343,614 + -1.4 343,614 + +0.4 343,643 - +0.7 343,809 + mlaF BNILDI_01760 0.22 -1.1 344,021 - mlaF BNILDI_01760 0.48 -1.3 344,070 + mlaF BNILDI_01760 0.54 +0.3 344,070 + mlaF BNILDI_01760 0.54 -0.5 344,071 - mlaF BNILDI_01760 0.54 +1.1 344,071 - mlaF BNILDI_01760 0.54 -0.2 344,100 + mlaF BNILDI_01760 0.58 +1.3 344,134 + mlaF BNILDI_01760 0.62 +0.7 344,134 + mlaF BNILDI_01760 0.62 -0.3 344,135 - mlaF BNILDI_01760 0.62 -0.3 344,135 - mlaF BNILDI_01760 0.62 -0.5 344,142 + mlaF BNILDI_01760 0.63 -0.3 344,142 + mlaF BNILDI_01760 0.63 +0.6 344,196 + mlaF BNILDI_01760 0.70 -3.4 344,196 + mlaF BNILDI_01760 0.70 -0.2 344,197 - mlaF BNILDI_01760 0.70 +0.5 344,197 - mlaF BNILDI_01760 0.70 +0.5 344,197 - mlaF BNILDI_01760 0.70 -0.0 344,197 - mlaF BNILDI_01760 0.70 -0.1 344,199 - mlaF BNILDI_01760 0.70 -0.5 344,226 + mlaF BNILDI_01760 0.74 -2.5 344,291 - mlaF BNILDI_01760 0.82 +0.9 344,302 - mlaF BNILDI_01760 0.83 -0.3 344,362 - +1.8 344,391 + +0.3 344,439 + -0.3 344,440 - -0.3 344,470 - +0.5 344,504 + +0.5 344,504 + +1.5 344,505 - -0.6 344,505 - +0.2 344,505 - +0.2 344,505 - +0.1 344,508 + -1.2
Or see this region's nucleotide sequence