Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt bsmA and yjfN are separated by 148 nucleotides yjfN and aidB are separated by 116 nucleotides aidB and yjfC are separated by 83 nucleotides
NOLOHH_04430: bsmA - biofilm peroxide resistance protein BsmA, at 802,126 to 802,455
bsmA
NOLOHH_04435: yjfN - protease activator YjfN, at 802,604 to 802,879
yjfN
NOLOHH_04440: aidB - isovaleryl-CoA dehydrogenase, at 802,996 to 804,621
aidB
NOLOHH_04445: yjfC - Putative acid--amine ligase YjfC, at 804,705 to 805,868
yjfC
Position (kb) 802
803
804
805 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 802.008 kb on - strand at 802.010 kb on + strand at 802.010 kb on + strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.018 kb on - strand at 802.018 kb on - strand at 802.110 kb on - strand at 802.112 kb on + strand at 802.121 kb on - strand at 802.125 kb on + strand at 802.125 kb on + strand at 802.125 kb on + strand at 802.125 kb on + strand at 802.126 kb on - strand at 802.126 kb on - strand at 802.144 kb on - strand at 802.144 kb on - strand at 802.144 kb on - strand at 802.146 kb on + strand at 802.146 kb on + strand at 802.152 kb on + strand at 802.152 kb on + strand at 802.153 kb on - strand at 802.153 kb on - strand at 802.156 kb on + strand at 802.156 kb on + strand at 802.172 kb on + strand, within bsmA at 802.190 kb on + strand, within bsmA at 802.190 kb on + strand, within bsmA at 802.191 kb on - strand, within bsmA at 802.191 kb on - strand, within bsmA at 802.284 kb on - strand, within bsmA at 802.293 kb on - strand, within bsmA at 802.378 kb on + strand, within bsmA at 802.381 kb on + strand, within bsmA at 802.381 kb on + strand, within bsmA at 802.382 kb on - strand, within bsmA at 802.382 kb on - strand, within bsmA at 802.382 kb on - strand, within bsmA at 802.382 kb on - strand, within bsmA at 802.426 kb on + strand at 802.444 kb on + strand at 802.450 kb on - strand at 802.450 kb on - strand at 802.453 kb on + strand at 802.454 kb on - strand at 802.467 kb on + strand at 802.467 kb on + strand at 802.467 kb on + strand at 802.468 kb on - strand at 802.468 kb on - strand at 802.468 kb on - strand at 802.468 kb on - strand at 802.468 kb on - strand at 802.468 kb on - strand at 802.471 kb on + strand at 802.472 kb on - strand at 802.472 kb on - strand at 802.472 kb on - strand at 802.481 kb on + strand at 802.481 kb on + strand at 802.482 kb on - strand at 802.499 kb on + strand at 802.507 kb on + strand at 802.520 kb on + strand at 802.520 kb on + strand at 802.548 kb on + strand at 802.614 kb on + strand at 802.614 kb on + strand at 802.614 kb on + strand at 802.614 kb on + strand at 802.614 kb on + strand at 802.614 kb on + strand at 802.615 kb on - strand at 802.615 kb on - strand at 802.615 kb on - strand at 802.639 kb on - strand, within yjfN at 802.639 kb on - strand, within yjfN at 802.646 kb on + strand, within yjfN at 802.646 kb on + strand, within yjfN at 802.646 kb on + strand, within yjfN at 802.647 kb on - strand, within yjfN at 802.717 kb on - strand, within yjfN at 802.732 kb on + strand, within yjfN at 802.738 kb on + strand, within yjfN at 802.738 kb on + strand, within yjfN at 802.739 kb on - strand, within yjfN at 802.768 kb on + strand, within yjfN at 802.769 kb on - strand, within yjfN at 802.809 kb on - strand, within yjfN at 802.816 kb on + strand, within yjfN at 802.817 kb on - strand, within yjfN at 802.819 kb on + strand, within yjfN at 802.820 kb on - strand, within yjfN at 802.826 kb on + strand, within yjfN at 802.826 kb on + strand, within yjfN at 802.826 kb on + strand, within yjfN at 802.826 kb on + strand, within yjfN at 802.826 kb on + strand, within yjfN at 802.826 kb on + strand, within yjfN at 802.827 kb on - strand, within yjfN at 802.827 kb on - strand, within yjfN at 802.871 kb on + strand at 802.871 kb on + strand at 802.871 kb on + strand at 802.871 kb on + strand at 802.871 kb on + strand at 802.871 kb on + strand at 802.872 kb on - strand at 802.872 kb on - strand at 802.872 kb on - strand at 803.073 kb on + strand at 803.073 kb on + strand at 803.074 kb on - strand at 803.077 kb on + strand at 803.077 kb on + strand at 803.078 kb on - strand at 803.078 kb on - strand at 803.078 kb on - strand at 803.121 kb on - strand at 803.121 kb on - strand at 803.121 kb on - strand at 803.155 kb on + strand at 803.156 kb on - strand at 803.156 kb on - strand at 803.166 kb on + strand, within aidB at 803.167 kb on - strand, within aidB at 803.167 kb on - strand, within aidB at 803.278 kb on + strand, within aidB at 803.278 kb on + strand, within aidB at 803.279 kb on - strand, within aidB at 803.279 kb on - strand, within aidB at 803.286 kb on - strand, within aidB at 803.286 kb on - strand, within aidB at 803.331 kb on + strand, within aidB at 803.331 kb on + strand, within aidB at 803.331 kb on + strand, within aidB at 803.331 kb on + strand, within aidB at 803.331 kb on + strand, within aidB at 803.331 kb on + strand, within aidB at 803.332 kb on - strand, within aidB at 803.332 kb on - strand, within aidB at 803.332 kb on - strand, within aidB at 803.332 kb on - strand, within aidB at 803.332 kb on - strand, within aidB at 803.332 kb on - strand, within aidB at 803.334 kb on + strand, within aidB at 803.355 kb on + strand, within aidB at 803.356 kb on - strand, within aidB at 803.363 kb on - strand, within aidB at 803.455 kb on - strand, within aidB at 803.490 kb on + strand, within aidB at 803.491 kb on - strand, within aidB at 803.491 kb on - strand, within aidB at 803.494 kb on + strand, within aidB at 803.599 kb on + strand, within aidB at 803.599 kb on + strand, within aidB at 803.600 kb on - strand, within aidB at 803.600 kb on - strand, within aidB at 803.666 kb on + strand, within aidB at 803.844 kb on + strand, within aidB at 803.844 kb on + strand, within aidB at 803.844 kb on + strand, within aidB at 803.982 kb on + strand, within aidB at 803.982 kb on + strand, within aidB at 803.982 kb on + strand, within aidB at 803.982 kb on + strand, within aidB at 803.983 kb on - strand, within aidB at 803.983 kb on - strand, within aidB at 803.983 kb on - strand, within aidB at 804.115 kb on + strand, within aidB at 804.115 kb on + strand, within aidB at 804.115 kb on + strand, within aidB at 804.116 kb on - strand, within aidB at 804.116 kb on - strand, within aidB at 804.128 kb on + strand, within aidB at 804.184 kb on + strand, within aidB at 804.185 kb on - strand, within aidB at 804.259 kb on - strand, within aidB at 804.333 kb on + strand, within aidB at 804.334 kb on - strand, within aidB at 804.334 kb on - strand, within aidB at 804.334 kb on - strand, within aidB at 804.337 kb on + strand, within aidB at 804.337 kb on + strand, within aidB at 804.337 kb on + strand, within aidB at 804.416 kb on - strand, within aidB at 804.563 kb on - strand at 804.653 kb on + strand at 804.653 kb on + strand at 804.654 kb on - strand at 804.654 kb on - strand at 804.657 kb on - strand at 804.695 kb on + strand at 804.696 kb on - strand at 804.696 kb on - strand at 804.718 kb on + strand at 804.719 kb on - strand at 804.823 kb on + strand, within yjfC at 804.823 kb on + strand, within yjfC at 804.823 kb on + strand, within yjfC at 804.823 kb on + strand, within yjfC at 804.823 kb on + strand, within yjfC at 804.823 kb on + strand, within yjfC at 804.823 kb on + strand, within yjfC at 804.823 kb on + strand, within yjfC at 804.824 kb on - strand, within yjfC at 804.824 kb on - strand, within yjfC at 804.824 kb on - strand, within yjfC at 804.824 kb on - strand, within yjfC at 804.824 kb on - strand, within yjfC at 804.824 kb on - strand, within yjfC at 804.863 kb on - strand, within yjfC at 804.863 kb on - strand, within yjfC at 804.955 kb on + strand, within yjfC at 804.956 kb on - strand, within yjfC at 804.966 kb on - strand, within yjfC at 804.974 kb on - strand, within yjfC at 804.974 kb on - strand, within yjfC at 805.076 kb on + strand, within yjfC at 805.077 kb on - strand, within yjfC at 805.080 kb on - strand, within yjfC at 805.088 kb on + strand, within yjfC at 805.181 kb on + strand, within yjfC at 805.222 kb on - strand, within yjfC at 805.255 kb on + strand, within yjfC at 805.255 kb on + strand, within yjfC at 805.256 kb on - strand, within yjfC at 805.256 kb on - strand, within yjfC at 805.256 kb on - strand, within yjfC at 805.259 kb on + strand, within yjfC at 805.259 kb on + strand, within yjfC at 805.303 kb on + strand, within yjfC at 805.304 kb on - strand, within yjfC at 805.304 kb on - strand, within yjfC at 805.304 kb on - strand, within yjfC at 805.304 kb on - strand, within yjfC at 805.313 kb on + strand, within yjfC at 805.369 kb on + strand, within yjfC at 805.369 kb on + strand, within yjfC at 805.369 kb on + strand, within yjfC at 805.379 kb on + strand, within yjfC at 805.414 kb on + strand, within yjfC at 805.415 kb on - strand, within yjfC at 805.492 kb on + strand, within yjfC at 805.492 kb on + strand, within yjfC at 805.492 kb on + strand, within yjfC at 805.493 kb on - strand, within yjfC at 805.493 kb on - strand, within yjfC at 805.519 kb on + strand, within yjfC at 805.520 kb on - strand, within yjfC at 805.574 kb on - strand, within yjfC at 805.621 kb on + strand, within yjfC
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 802,008 - -0.6 802,010 + +0.5 802,010 + +0.9 802,011 - -0.3 802,011 - +0.2 802,011 - -0.3 802,011 - -0.0 802,011 - +0.6 802,011 - -0.5 802,018 - +0.5 802,018 - -0.6 802,110 - -0.3 802,112 + -0.3 802,121 - +0.8 802,125 + +0.2 802,125 + +0.1 802,125 + +0.4 802,125 + -0.0 802,126 - -2.3 802,126 - -1.2 802,144 - +0.5 802,144 - +0.8 802,144 - -3.5 802,146 + -0.3 802,146 + -0.4 802,152 + -0.8 802,152 + +0.1 802,153 - +0.8 802,153 - -0.0 802,156 + -0.1 802,156 + +0.2 802,172 + bsmA NOLOHH_04430 0.14 +0.3 802,190 + bsmA NOLOHH_04430 0.19 +0.7 802,190 + bsmA NOLOHH_04430 0.19 +0.3 802,191 - bsmA NOLOHH_04430 0.20 +0.2 802,191 - bsmA NOLOHH_04430 0.20 -0.0 802,284 - bsmA NOLOHH_04430 0.48 +0.4 802,293 - bsmA NOLOHH_04430 0.51 -0.5 802,378 + bsmA NOLOHH_04430 0.76 +0.2 802,381 + bsmA NOLOHH_04430 0.77 -0.2 802,381 + bsmA NOLOHH_04430 0.77 -0.2 802,382 - bsmA NOLOHH_04430 0.78 +0.1 802,382 - bsmA NOLOHH_04430 0.78 -0.9 802,382 - bsmA NOLOHH_04430 0.78 -0.7 802,382 - bsmA NOLOHH_04430 0.78 -0.5 802,426 + -0.8 802,444 + -0.4 802,450 - +0.5 802,450 - -1.3 802,453 + +0.1 802,454 - +1.0 802,467 + -0.4 802,467 + +0.3 802,467 + -0.2 802,468 - +1.7 802,468 - -0.2 802,468 - +0.8 802,468 - +0.1 802,468 - -0.4 802,468 - -0.9 802,471 + +0.0 802,472 - +0.0 802,472 - +0.3 802,472 - +0.1 802,481 + +0.5 802,481 + +0.3 802,482 - -0.1 802,499 + -0.9 802,507 + +0.5 802,520 + -0.1 802,520 + -0.1 802,548 + +0.6 802,614 + -0.3 802,614 + -0.5 802,614 + -0.7 802,614 + +0.3 802,614 + -0.2 802,614 + -0.8 802,615 - -1.5 802,615 - -0.2 802,615 - -0.9 802,639 - yjfN NOLOHH_04435 0.13 -0.0 802,639 - yjfN NOLOHH_04435 0.13 +0.3 802,646 + yjfN NOLOHH_04435 0.15 -0.1 802,646 + yjfN NOLOHH_04435 0.15 +0.2 802,646 + yjfN NOLOHH_04435 0.15 +0.4 802,647 - yjfN NOLOHH_04435 0.16 -0.5 802,717 - yjfN NOLOHH_04435 0.41 -0.8 802,732 + yjfN NOLOHH_04435 0.46 +0.6 802,738 + yjfN NOLOHH_04435 0.49 -0.1 802,738 + yjfN NOLOHH_04435 0.49 -1.0 802,739 - yjfN NOLOHH_04435 0.49 +0.5 802,768 + yjfN NOLOHH_04435 0.59 +0.3 802,769 - yjfN NOLOHH_04435 0.60 +0.6 802,809 - yjfN NOLOHH_04435 0.74 +0.8 802,816 + yjfN NOLOHH_04435 0.77 -0.2 802,817 - yjfN NOLOHH_04435 0.77 -0.0 802,819 + yjfN NOLOHH_04435 0.78 +0.5 802,820 - yjfN NOLOHH_04435 0.78 -0.2 802,826 + yjfN NOLOHH_04435 0.80 -0.1 802,826 + yjfN NOLOHH_04435 0.80 -0.0 802,826 + yjfN NOLOHH_04435 0.80 +2.3 802,826 + yjfN NOLOHH_04435 0.80 -0.4 802,826 + yjfN NOLOHH_04435 0.80 -0.3 802,826 + yjfN NOLOHH_04435 0.80 -0.1 802,827 - yjfN NOLOHH_04435 0.81 -0.1 802,827 - yjfN NOLOHH_04435 0.81 +0.7 802,871 + -0.4 802,871 + +1.0 802,871 + -0.1 802,871 + +0.4 802,871 + +0.3 802,871 + -0.1 802,872 - +0.3 802,872 - +0.4 802,872 - +0.3 803,073 + -0.2 803,073 + +0.1 803,074 - -0.5 803,077 + +0.0 803,077 + -0.3 803,078 - -1.7 803,078 - +0.4 803,078 - +0.5 803,121 - -0.1 803,121 - +0.2 803,121 - +0.4 803,155 + +0.6 803,156 - +0.1 803,156 - +1.5 803,166 + aidB NOLOHH_04440 0.10 -0.7 803,167 - aidB NOLOHH_04440 0.11 +0.7 803,167 - aidB NOLOHH_04440 0.11 +0.4 803,278 + aidB NOLOHH_04440 0.17 +0.2 803,278 + aidB NOLOHH_04440 0.17 +0.7 803,279 - aidB NOLOHH_04440 0.17 -0.3 803,279 - aidB NOLOHH_04440 0.17 +0.3 803,286 - aidB NOLOHH_04440 0.18 +0.2 803,286 - aidB NOLOHH_04440 0.18 +0.4 803,331 + aidB NOLOHH_04440 0.21 -1.3 803,331 + aidB NOLOHH_04440 0.21 +0.2 803,331 + aidB NOLOHH_04440 0.21 +0.2 803,331 + aidB NOLOHH_04440 0.21 +1.2 803,331 + aidB NOLOHH_04440 0.21 +0.3 803,331 + aidB NOLOHH_04440 0.21 -0.1 803,332 - aidB NOLOHH_04440 0.21 +0.2 803,332 - aidB NOLOHH_04440 0.21 -0.3 803,332 - aidB NOLOHH_04440 0.21 +0.1 803,332 - aidB NOLOHH_04440 0.21 -0.5 803,332 - aidB NOLOHH_04440 0.21 +0.1 803,332 - aidB NOLOHH_04440 0.21 -0.1 803,334 + aidB NOLOHH_04440 0.21 +1.0 803,355 + aidB NOLOHH_04440 0.22 -0.0 803,356 - aidB NOLOHH_04440 0.22 +1.3 803,363 - aidB NOLOHH_04440 0.23 -0.9 803,455 - aidB NOLOHH_04440 0.28 -0.1 803,490 + aidB NOLOHH_04440 0.30 +0.6 803,491 - aidB NOLOHH_04440 0.30 +0.3 803,491 - aidB NOLOHH_04440 0.30 -1.5 803,494 + aidB NOLOHH_04440 0.31 +1.6 803,599 + aidB NOLOHH_04440 0.37 +0.6 803,599 + aidB NOLOHH_04440 0.37 -0.6 803,600 - aidB NOLOHH_04440 0.37 +0.0 803,600 - aidB NOLOHH_04440 0.37 -0.5 803,666 + aidB NOLOHH_04440 0.41 -1.2 803,844 + aidB NOLOHH_04440 0.52 +0.6 803,844 + aidB NOLOHH_04440 0.52 +0.5 803,844 + aidB NOLOHH_04440 0.52 +0.0 803,982 + aidB NOLOHH_04440 0.61 -0.1 803,982 + aidB NOLOHH_04440 0.61 +1.1 803,982 + aidB NOLOHH_04440 0.61 -1.0 803,982 + aidB NOLOHH_04440 0.61 +1.6 803,983 - aidB NOLOHH_04440 0.61 +0.8 803,983 - aidB NOLOHH_04440 0.61 -1.0 803,983 - aidB NOLOHH_04440 0.61 -0.9 804,115 + aidB NOLOHH_04440 0.69 +1.0 804,115 + aidB NOLOHH_04440 0.69 +0.6 804,115 + aidB NOLOHH_04440 0.69 +0.4 804,116 - aidB NOLOHH_04440 0.69 +0.6 804,116 - aidB NOLOHH_04440 0.69 +0.1 804,128 + aidB NOLOHH_04440 0.70 +1.0 804,184 + aidB NOLOHH_04440 0.73 +1.1 804,185 - aidB NOLOHH_04440 0.73 -0.1 804,259 - aidB NOLOHH_04440 0.78 +0.1 804,333 + aidB NOLOHH_04440 0.82 -0.0 804,334 - aidB NOLOHH_04440 0.82 +0.1 804,334 - aidB NOLOHH_04440 0.82 +0.7 804,334 - aidB NOLOHH_04440 0.82 -0.9 804,337 + aidB NOLOHH_04440 0.82 -0.3 804,337 + aidB NOLOHH_04440 0.82 -0.7 804,337 + aidB NOLOHH_04440 0.82 +0.1 804,416 - aidB NOLOHH_04440 0.87 +0.3 804,563 - -1.4 804,653 + +0.3 804,653 + +0.4 804,654 - -1.0 804,654 - -0.3 804,657 - -1.6 804,695 + -0.3 804,696 - -0.0 804,696 - +0.4 804,718 + -0.3 804,719 - +0.9 804,823 + yjfC NOLOHH_04445 0.10 -0.8 804,823 + yjfC NOLOHH_04445 0.10 -0.3 804,823 + yjfC NOLOHH_04445 0.10 +1.1 804,823 + yjfC NOLOHH_04445 0.10 -0.4 804,823 + yjfC NOLOHH_04445 0.10 -0.8 804,823 + yjfC NOLOHH_04445 0.10 +0.7 804,823 + yjfC NOLOHH_04445 0.10 +0.1 804,823 + yjfC NOLOHH_04445 0.10 +0.8 804,824 - yjfC NOLOHH_04445 0.10 -0.4 804,824 - yjfC NOLOHH_04445 0.10 +1.1 804,824 - yjfC NOLOHH_04445 0.10 -0.4 804,824 - yjfC NOLOHH_04445 0.10 +0.1 804,824 - yjfC NOLOHH_04445 0.10 -0.1 804,824 - yjfC NOLOHH_04445 0.10 -0.0 804,863 - yjfC NOLOHH_04445 0.14 -1.6 804,863 - yjfC NOLOHH_04445 0.14 +0.7 804,955 + yjfC NOLOHH_04445 0.21 +0.0 804,956 - yjfC NOLOHH_04445 0.22 +0.1 804,966 - yjfC NOLOHH_04445 0.22 +0.6 804,974 - yjfC NOLOHH_04445 0.23 -2.8 804,974 - yjfC NOLOHH_04445 0.23 -0.3 805,076 + yjfC NOLOHH_04445 0.32 +0.1 805,077 - yjfC NOLOHH_04445 0.32 +0.2 805,080 - yjfC NOLOHH_04445 0.32 +0.4 805,088 + yjfC NOLOHH_04445 0.33 +0.7 805,181 + yjfC NOLOHH_04445 0.41 +0.9 805,222 - yjfC NOLOHH_04445 0.44 +0.1 805,255 + yjfC NOLOHH_04445 0.47 +0.2 805,255 + yjfC NOLOHH_04445 0.47 -0.7 805,256 - yjfC NOLOHH_04445 0.47 +0.3 805,256 - yjfC NOLOHH_04445 0.47 +0.3 805,256 - yjfC NOLOHH_04445 0.47 -0.0 805,259 + yjfC NOLOHH_04445 0.48 +0.5 805,259 + yjfC NOLOHH_04445 0.48 -1.5 805,303 + yjfC NOLOHH_04445 0.51 +0.9 805,304 - yjfC NOLOHH_04445 0.51 +0.0 805,304 - yjfC NOLOHH_04445 0.51 +0.6 805,304 - yjfC NOLOHH_04445 0.51 +0.1 805,304 - yjfC NOLOHH_04445 0.51 -0.8 805,313 + yjfC NOLOHH_04445 0.52 +0.1 805,369 + yjfC NOLOHH_04445 0.57 +0.5 805,369 + yjfC NOLOHH_04445 0.57 +0.7 805,369 + yjfC NOLOHH_04445 0.57 +0.2 805,379 + yjfC NOLOHH_04445 0.58 +0.6 805,414 + yjfC NOLOHH_04445 0.61 +0.8 805,415 - yjfC NOLOHH_04445 0.61 +0.4 805,492 + yjfC NOLOHH_04445 0.68 -0.5 805,492 + yjfC NOLOHH_04445 0.68 +1.1 805,492 + yjfC NOLOHH_04445 0.68 +0.2 805,493 - yjfC NOLOHH_04445 0.68 +0.7 805,493 - yjfC NOLOHH_04445 0.68 -0.4 805,519 + yjfC NOLOHH_04445 0.70 +0.7 805,520 - yjfC NOLOHH_04445 0.70 +0.1 805,574 - yjfC NOLOHH_04445 0.75 +0.7 805,621 + yjfC NOLOHH_04445 0.79 -1.1
Or see this region's nucleotide sequence