Strain Fitness in Erwinia amylovora T8 around OLJFJH_17880

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
3,755,521	+				+0.6
3,755,522	-				-3.2
3,755,565	+				+0.0
3,755,654	+		OLJFJH_17870	0.16	-0.5
3,755,687	+		OLJFJH_17870	0.25	+0.4
3,755,778	-		OLJFJH_17870	0.51	+0.0
3,755,806	-		OLJFJH_17870	0.58	-1.1
3,755,806	-		OLJFJH_17870	0.58	+0.0
3,755,837	+		OLJFJH_17870	0.67	-0.4
3,755,884	+		OLJFJH_17870	0.81	-0.4
3,755,884	+		OLJFJH_17870	0.81	-1.9
3,755,992	-				+0.8
3,756,000	-				-1.1
3,756,083	+				+0.3
3,756,084	-				-0.6
3,756,162	+		OLJFJH_17875	0.17	-0.8
3,756,316	+		OLJFJH_17875	0.56	-0.6
3,756,366	+		OLJFJH_17875	0.69	+0.2
3,756,366	+		OLJFJH_17875	0.69	-0.2
3,756,388	+		OLJFJH_17875	0.74	+0.4
3,756,389	-		OLJFJH_17875	0.75	+0.3
3,756,611	+		OLJFJH_17880	0.47	-1.0
3,756,611	+		OLJFJH_17880	0.47	-1.7
3,756,678	+		OLJFJH_17880	0.78	-1.2
3,756,695	+		OLJFJH_17880	0.85	-2.3
3,756,733	-				-1.0
3,756,754	+				-0.7
3,756,754	+				-0.0
3,756,963	+				-0.5
3,756,963	+				+1.0
3,756,963	+				-1.3
3,756,964	-				-0.9
3,757,005	+		OLJFJH_17890	0.16	-1.1
3,757,005	+		OLJFJH_17890	0.16	-0.9
3,757,006	-		OLJFJH_17890	0.17	-0.3
3,757,006	-		OLJFJH_17890	0.17	-0.1
3,757,104	+		OLJFJH_17890	0.41	-0.1
3,757,104	+		OLJFJH_17890	0.41	-0.1
3,757,104	+		OLJFJH_17890	0.41	+0.5
3,757,104	+		OLJFJH_17890	0.41	-0.6
3,757,105	-		OLJFJH_17890	0.41	+3.6
3,757,211	-		OLJFJH_17890	0.67	-0.9
3,757,211	-		OLJFJH_17890	0.67	-0.4
3,757,404	+				+0.3
3,757,413	+				-1.1
3,757,413	+				+0.6
3,757,429	+		OLJFJH_17895	0.11	+0.6
3,757,429	+		OLJFJH_17895	0.11	+1.3
3,757,543	-		OLJFJH_17895	0.32	+3.2
3,757,543	-		OLJFJH_17895	0.32	-0.1
3,757,562	-		OLJFJH_17895	0.35	+2.4
3,757,562	-		OLJFJH_17895	0.35	-1.2
3,757,687	-		OLJFJH_17895	0.58	-1.5