Strain Fitness in Erwinia amylovora T8 around OLJFJH_17705

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
3,721,559	+				-0.7
3,721,559	+				+0.9
3,721,582	-				-0.6
3,721,606	+				+0.4
3,722,167	+		OLJFJH_17700	0.31	-1.1
3,722,168	-		OLJFJH_17700	0.31	+0.4
3,722,168	-		OLJFJH_17700	0.31	+0.8
3,722,335	-		OLJFJH_17700	0.72	-0.2
3,722,335	-		OLJFJH_17700	0.72	-0.3
3,722,491	+				-0.2
3,722,492	-				+0.0
3,722,492	-				-0.1
3,722,497	+				-1.6
3,722,498	-				-0.9
3,722,498	-				-0.3
3,722,503	-				+0.2
3,722,542	-				-0.0
3,722,542	-				+0.3
3,722,542	-				+1.9
3,722,543	+				+1.9
3,722,544	+				-0.4
3,722,544	+				-0.9
3,722,544	+				+1.0
3,722,544	+				-1.1
3,722,544	+				-0.1
3,722,545	-				-0.0
3,722,545	-				-0.2
3,722,545	-				-0.2
3,722,869	-		OLJFJH_17705	0.13	+0.4
3,722,869	-		OLJFJH_17705	0.13	-0.6
3,723,171	+		OLJFJH_17705	0.25	+1.2
3,723,171	+		OLJFJH_17705	0.25	+1.6
3,723,171	+		OLJFJH_17705	0.25	-0.4
3,723,172	-		OLJFJH_17705	0.25	-0.5
3,723,219	+		OLJFJH_17705	0.27	-0.1
3,723,220	-		OLJFJH_17705	0.27	-0.0
3,723,356	+		OLJFJH_17705	0.32	-0.6
3,723,401	-		OLJFJH_17705	0.34	-1.5
3,723,404	-		OLJFJH_17705	0.34	-1.3
3,723,404	-		OLJFJH_17705	0.34	-0.8
3,723,404	-		OLJFJH_17705	0.34	-0.3
3,723,447	+		OLJFJH_17705	0.36	+0.2
3,723,447	+		OLJFJH_17705	0.36	+0.2
3,723,447	+		OLJFJH_17705	0.36	-0.3
3,723,447	+		OLJFJH_17705	0.36	+2.6
3,723,448	-		OLJFJH_17705	0.36	-0.6
3,723,448	-		OLJFJH_17705	0.36	-1.9
3,723,448	-		OLJFJH_17705	0.36	-1.6
3,723,448	-		OLJFJH_17705	0.36	-1.0
3,723,448	-		OLJFJH_17705	0.36	-0.6
3,723,448	-		OLJFJH_17705	0.36	+0.7
3,723,448	-		OLJFJH_17705	0.36	-1.1
3,723,531	-		OLJFJH_17705	0.39	-1.0
3,723,545	+		OLJFJH_17705	0.40	-0.9
3,723,561	+		OLJFJH_17705	0.41	+1.3
3,723,570	-		OLJFJH_17705	0.41	+0.2
3,723,744	-		OLJFJH_17705	0.48	+2.4
3,723,744	-		OLJFJH_17705	0.48	-0.8
3,723,819	+		OLJFJH_17705	0.51	+1.9
3,723,820	-		OLJFJH_17705	0.51	-0.6
3,723,944	-		OLJFJH_17705	0.56	+0.2
3,723,975	+		OLJFJH_17705	0.57	+1.2
3,724,162	-		OLJFJH_17705	0.64	-0.8
3,724,300	-		OLJFJH_17705	0.70	+0.4
3,724,445	+		OLJFJH_17705	0.76	+0.3
3,724,839	-				+0.3
3,724,866	+				-0.0
3,724,866	+				+0.1
3,724,866	+				-0.6
3,724,897	+				+0.3
3,724,897	+				+0.0
3,724,898	-				+0.5
3,724,899	+				+0.7
3,725,112	+				+0.5
3,725,112	+				-1.2
3,725,112	+				+0.2
3,725,132	+				-0.7
3,725,133	-				-0.6
3,725,233	+		OLJFJH_17710	0.12	+0.6
3,725,233	+		OLJFJH_17710	0.12	+0.1
3,725,234	-		OLJFJH_17710	0.13	-1.0
3,725,234	-		OLJFJH_17710	0.13	-0.6
3,725,249	+		OLJFJH_17710	0.14	-1.0
3,725,250	-		OLJFJH_17710	0.15	-0.6
3,725,270	+		OLJFJH_17710	0.17	+0.3
3,725,270	+		OLJFJH_17710	0.17	+0.2
3,725,271	-		OLJFJH_17710	0.17	-0.2
3,725,471	+		OLJFJH_17710	0.42	+1.5
3,725,472	-		OLJFJH_17710	0.42	+2.3
3,725,590	+		OLJFJH_17710	0.57	+0.7
3,725,722	+		OLJFJH_17710	0.73	-0.8
3,725,843	-		OLJFJH_17710	0.88	-0.9
3,725,843	-		OLJFJH_17710	0.88	+0.3
3,725,966	-				-0.4
3,725,970	-				-0.8
3,725,981	+				-0.7
3,725,990	-				-3.3