Strain Fitness in Erwinia amylovora T8 around OLJFJH_17550

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
3,698,986	+		OLJFJH_17535	0.16	+2.3
3,698,986	+		OLJFJH_17535	0.16	+0.5
3,698,986	+		OLJFJH_17535	0.16	-1.0
3,698,987	-		OLJFJH_17535	0.16	-0.2
3,699,139	-		OLJFJH_17535	0.87	+1.6
3,699,258	+		OLJFJH_17540	0.53	-1.0
3,699,259	-		OLJFJH_17540	0.54	-0.7
3,699,259	-		OLJFJH_17540	0.54	-0.6
3,699,260	+		OLJFJH_17540	0.54	-0.8
3,699,260	+		OLJFJH_17540	0.54	+0.0
3,699,260	+		OLJFJH_17540	0.54	+0.3
3,699,374	-				+0.7
3,699,415	+		OLJFJH_17545	0.13	+0.6
3,699,415	+		OLJFJH_17545	0.13	+0.2
3,699,478	-		OLJFJH_17545	0.24	+0.3
3,699,594	-		OLJFJH_17545	0.44	-1.7
3,699,594	-		OLJFJH_17545	0.44	-1.3
3,699,628	+		OLJFJH_17545	0.50	+0.4
3,699,640	-		OLJFJH_17545	0.52	+0.5
3,699,649	-		OLJFJH_17545	0.53	-0.3
3,699,662	+		OLJFJH_17545	0.56	-0.5
3,699,709	+		OLJFJH_17545	0.64	+0.3
3,699,710	-		OLJFJH_17545	0.64	-1.4
3,699,710	-		OLJFJH_17545	0.64	-0.2
3,699,734	-		OLJFJH_17545	0.68	-0.6
3,699,734	-		OLJFJH_17545	0.68	-0.8
3,699,736	+		OLJFJH_17545	0.68	+1.5
3,699,737	-		OLJFJH_17545	0.68	+1.5
3,699,904	+				-0.2
3,699,905	-				+2.2
3,699,954	-		OLJFJH_17550	0.20	-1.3
3,699,981	+		OLJFJH_17550	0.35	-1.5
3,700,087	+				-0.3
3,700,088	-				+0.7
3,700,091	+				+1.1
3,700,091	+				+0.3
3,700,091	+				+0.8
3,700,091	+				+1.5
3,700,091	+				+2.0
3,700,092	-				+1.7
3,700,314	+		OLJFJH_17555	0.25	-0.2
3,700,315	-		OLJFJH_17555	0.25	-0.2
3,700,315	-		OLJFJH_17555	0.25	-0.6
3,700,315	-		OLJFJH_17555	0.25	+0.3
3,700,315	-		OLJFJH_17555	0.25	-0.2
3,700,338	+		OLJFJH_17555	0.28	+0.6
3,700,380	+		OLJFJH_17555	0.32	+0.4
3,700,381	-		OLJFJH_17555	0.32	-0.2
3,700,429	-		OLJFJH_17555	0.38	+4.1
3,700,431	+		OLJFJH_17555	0.38	-0.3
3,700,447	+		OLJFJH_17555	0.40	+0.8
3,700,447	+		OLJFJH_17555	0.40	+3.7
3,700,450	+		OLJFJH_17555	0.40	-1.7
3,700,451	-		OLJFJH_17555	0.40	+1.9
3,700,451	-		OLJFJH_17555	0.40	-0.1
3,700,451	-		OLJFJH_17555	0.40	-1.0
3,700,451	-		OLJFJH_17555	0.40	-0.6
3,700,732	-		OLJFJH_17555	0.72	+0.2
3,700,799	-		OLJFJH_17555	0.79	+0.1
3,700,930	+				+0.1