Strain Fitness in Erwinia amylovora T8 around OLJFJH_16780

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
3,542,547	+		OLJFJH_16770	0.63	+0.3
3,542,573	-		OLJFJH_16770	0.66	-1.0
3,542,577	-		OLJFJH_16770	0.66	+0.7
3,542,640	+		OLJFJH_16770	0.72	-0.7
3,542,697	-		OLJFJH_16770	0.77	-0.8
3,542,840	+				-0.1
3,542,939	+				-0.0
3,543,017	+				-0.0
3,543,032	+		OLJFJH_16775	0.12	+1.5
3,543,093	-		OLJFJH_16775	0.24	+0.1
3,543,093	-		OLJFJH_16775	0.24	-0.2
3,543,127	+		OLJFJH_16775	0.31	-0.5
3,543,128	-		OLJFJH_16775	0.32	+1.9
3,543,204	-		OLJFJH_16775	0.48	+0.2
3,543,323	-		OLJFJH_16775	0.73	-2.4
3,543,399	+		OLJFJH_16775	0.88	+0.2
3,543,400	-		OLJFJH_16775	0.89	-0.6
3,543,445	+				-0.2
3,543,445	+				-1.1
3,543,445	+				-1.5
3,543,445	+				-0.6
3,543,446	-				-1.2
3,543,446	-				+2.5
3,543,446	-				+1.0
3,543,446	-				+0.9
3,543,447	+				-1.4
3,543,832	-		OLJFJH_16780	0.30	-1.1
3,543,837	+		OLJFJH_16780	0.30	-0.4
3,543,838	-		OLJFJH_16780	0.30	-0.9
3,543,991	-		OLJFJH_16780	0.46	-0.6
3,544,232	+		OLJFJH_16780	0.70	-2.3
3,544,232	+		OLJFJH_16780	0.70	-1.2
3,544,270	-		OLJFJH_16780	0.74	+0.2
3,544,273	+		OLJFJH_16780	0.74	-0.5
3,544,273	+		OLJFJH_16780	0.74	-0.8
3,544,273	+		OLJFJH_16780	0.74	-0.4
3,544,274	-		OLJFJH_16780	0.74	-0.2
3,544,274	-		OLJFJH_16780	0.74	+0.2
3,544,276	-		OLJFJH_16780	0.74	+1.0
3,544,276	-		OLJFJH_16780	0.74	+2.6
3,544,276	-		OLJFJH_16780	0.74	+0.2
3,544,276	-		OLJFJH_16780	0.74	-1.3
3,544,380	-		OLJFJH_16780	0.85	-1.0
3,544,514	+				-1.6
3,544,608	+				+1.1
3,544,608	+				-1.1
3,544,632	+				+0.6
3,544,633	-				-1.9
3,544,633	-				-0.1
3,544,667	+				-1.3
3,544,679	+				-0.5
3,544,679	+				-1.6
3,544,680	-				+0.3
3,544,744	+				-0.1
3,544,744	+				+1.2
3,544,744	+				-1.2
3,544,875	+		OLJFJH_16785	0.25	+0.3
3,544,906	+		OLJFJH_16785	0.29	+0.4
3,544,986	+		OLJFJH_16785	0.39	+0.4
3,544,986	+		OLJFJH_16785	0.39	+1.4
3,544,986	+		OLJFJH_16785	0.39	+3.2
3,544,986	+		OLJFJH_16785	0.39	+0.0
3,545,043	-		OLJFJH_16785	0.46	+0.3
3,545,043	-		OLJFJH_16785	0.46	+0.5
3,545,043	-		OLJFJH_16785	0.46	-0.6
3,545,340	+		OLJFJH_16785	0.82	-0.5
3,545,340	+		OLJFJH_16785	0.82	-1.1
3,545,507	+				+3.2
3,545,508	-				+1.2