Strain Fitness in Erwinia amylovora T8 around OLJFJH_14370
Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:PBS;Temp:28;Samp:16-7 |
---|---|---|---|---|---|
remove | |||||
3,035,260 | + | OLJFJH_14360 | 0.39 | +0.2 | |
3,035,861 | + | OLJFJH_14365 | 0.43 | +1.0 | |
3,035,995 | + | OLJFJH_14365 | 0.66 | -0.5 | |
3,036,149 | + | -0.8 | |||
3,036,172 | + | +0.7 | |||
3,036,712 | + | OLJFJH_14370 | 0.22 | +0.2 | |
3,037,450 | + | OLJFJH_14370 | 0.54 | -0.5 | |
3,037,483 | + | OLJFJH_14370 | 0.55 | -0.5 | |
3,037,483 | + | OLJFJH_14370 | 0.55 | -1.3 | |
3,037,713 | + | OLJFJH_14370 | 0.65 | +0.5 | |
3,038,539 | + | -0.2 | |||
3,038,571 | + | -0.3 | |||
3,038,577 | + | -0.3 | |||
3,039,017 | + | OLJFJH_14375 | 0.45 | -1.1 | |
3,039,423 | + | OLJFJH_14375 | 0.83 | -0.0 |
Or see this region's nucleotide sequence