Strain Fitness in Erwinia amylovora T8 around OLJFJH_09300

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
1,924,947	-				+2.0
1,924,961	+				-0.5
1,924,997	-				+0.6
1,924,999	+				-0.7
1,925,012	+				+2.0
1,925,085	-				+0.6
1,925,085	-				-0.6
1,925,120	+				-0.0
1,925,121	-				+0.2
1,925,124	+				+0.5
1,925,271	-				-0.8
1,925,299	+		OLJFJH_09295	0.11	-0.2
1,925,314	+		OLJFJH_09295	0.15	+1.5
1,925,315	-		OLJFJH_09295	0.15	-0.4
1,925,405	+		OLJFJH_09295	0.40	-0.0
1,925,405	+		OLJFJH_09295	0.40	-1.4
1,925,405	+		OLJFJH_09295	0.40	-0.8
1,925,406	-		OLJFJH_09295	0.41	+0.1
1,925,406	-		OLJFJH_09295	0.41	-0.5
1,925,406	-		OLJFJH_09295	0.41	-0.5
1,925,406	-		OLJFJH_09295	0.41	+0.0
1,925,408	+		OLJFJH_09295	0.41	-0.8
1,925,409	-		OLJFJH_09295	0.41	-0.6
1,925,409	-		OLJFJH_09295	0.41	-0.5
1,925,488	+		OLJFJH_09295	0.63	+1.0
1,925,488	+		OLJFJH_09295	0.63	+0.2
1,925,488	+		OLJFJH_09295	0.63	+0.2
1,925,489	-		OLJFJH_09295	0.64	-0.7
1,925,605	+				+0.1
1,925,619	+				+1.6
1,925,619	+				-0.7
1,925,619	+				+1.5
1,925,719	+				-0.9
1,925,805	+				-0.1
1,925,825	+				-0.9
1,925,838	+				+0.5
1,925,842	+				-0.3
1,925,842	+				+0.4
1,925,842	+				-0.6
1,925,858	+				-0.7
1,925,859	-				-2.8
1,925,859	-				-3.3
1,925,877	+				-0.9
1,925,878	-				-3.6
1,925,966	-				-2.7
1,926,206	+		OLJFJH_09300	0.17	-0.6
1,926,207	-		OLJFJH_09300	0.17	-4.3
1,926,295	+		OLJFJH_09300	0.22	-2.8
1,926,295	+		OLJFJH_09300	0.22	-2.2
1,926,295	+		OLJFJH_09300	0.22	-2.9
1,926,296	-		OLJFJH_09300	0.22	-4.4
1,926,296	-		OLJFJH_09300	0.22	-1.6
1,926,299	+		OLJFJH_09300	0.22	-0.4
1,926,375	+		OLJFJH_09300	0.26	-0.2
1,926,375	+		OLJFJH_09300	0.26	-2.1
1,926,381	+		OLJFJH_09300	0.26	-2.3
1,926,381	+		OLJFJH_09300	0.26	-0.3
1,926,382	-		OLJFJH_09300	0.26	-1.3
1,926,676	+		OLJFJH_09300	0.43	-0.2
1,926,676	+		OLJFJH_09300	0.43	-1.6
1,926,677	-		OLJFJH_09300	0.43	-2.0
1,926,877	+		OLJFJH_09300	0.54	-2.1
1,926,882	-		OLJFJH_09300	0.54	-2.6
1,926,904	-		OLJFJH_09300	0.55	-2.9
1,926,920	+		OLJFJH_09300	0.56	-1.5
1,926,921	-		OLJFJH_09300	0.56	-0.0
1,926,995	+		OLJFJH_09300	0.60	-2.4
1,927,119	-		OLJFJH_09300	0.67	-0.9
1,927,278	-		OLJFJH_09300	0.76	-2.8
1,927,319	+		OLJFJH_09300	0.78	+2.1
1,927,320	-		OLJFJH_09300	0.78	-3.8
1,927,457	-		OLJFJH_09300	0.86	-3.5
1,927,481	+		OLJFJH_09300	0.87	-2.6
1,927,481	+		OLJFJH_09300	0.87	-2.8
1,927,482	-		OLJFJH_09300	0.87	-1.2
1,927,482	-		OLJFJH_09300	0.87	-1.5
1,927,489	+		OLJFJH_09300	0.88	-3.2
1,927,492	+		OLJFJH_09300	0.88	-4.6
1,927,493	-		OLJFJH_09300	0.88	-1.8
1,927,553	+				-3.4
1,927,553	+				-3.3
1,927,554	-				-1.6
1,927,557	+				-3.4
1,927,557	+				-2.0
1,927,557	+				-2.5
1,927,557	+				-2.8
1,927,558	-				-3.3
1,927,705	-				-1.2
1,927,705	-				-5.1
1,927,705	-				-2.1
1,927,708	-				-2.5
1,927,790	+				-1.9
1,927,791	-				-4.3
1,927,883	+		OLJFJH_09305	0.10	-2.6
1,927,883	+		OLJFJH_09305	0.10	-0.4
1,927,884	-		OLJFJH_09305	0.10	-2.0
1,927,884	-		OLJFJH_09305	0.10	-1.5
1,927,884	-		OLJFJH_09305	0.10	-1.9
1,928,222	+		OLJFJH_09305	0.30	-0.8
1,928,223	-		OLJFJH_09305	0.30	-2.9
1,928,274	-		OLJFJH_09305	0.33	-4.8
1,928,342	+		OLJFJH_09305	0.37	-2.5
1,928,343	-		OLJFJH_09305	0.37	-1.5
1,928,486	-		OLJFJH_09305	0.45	-3.1
1,928,486	-		OLJFJH_09305	0.45	-0.7
1,928,486	-		OLJFJH_09305	0.45	-2.6
1,928,501	-		OLJFJH_09305	0.46	+0.6
1,928,510	+		OLJFJH_09305	0.47	-3.2
1,928,510	+		OLJFJH_09305	0.47	-2.6
1,928,510	+		OLJFJH_09305	0.47	-1.2
1,928,510	+		OLJFJH_09305	0.47	-2.3
1,928,510	+		OLJFJH_09305	0.47	-2.7
1,928,511	-		OLJFJH_09305	0.47	-3.0
1,928,511	-		OLJFJH_09305	0.47	-4.8
1,928,511	-		OLJFJH_09305	0.47	-3.7
1,928,551	+		OLJFJH_09305	0.49	-3.7
1,928,637	-		OLJFJH_09305	0.54	-1.8