Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_08270 and OLJFJH_08275 overlap by 4 nucleotides OLJFJH_08275 and OLJFJH_08280 are separated by 76 nucleotides OLJFJH_08280 and OLJFJH_08285 are separated by 7 nucleotides OLJFJH_08285 and OLJFJH_08290 are separated by 38 nucleotides
OLJFJH_08270: OLJFJH_08270 - Endochitinase 1 Flags:, at 1,708,061 to 1,710,955
_08270
OLJFJH_08275: OLJFJH_08275 - hypothetical protein, at 1,710,952 to 1,711,359
_08275
OLJFJH_08280: OLJFJH_08280 - hypothetical protein, at 1,711,436 to 1,711,693
_08280
OLJFJH_08285: OLJFJH_08285 - hypothetical protein, at 1,711,701 to 1,711,973
_08285
OLJFJH_08290: OLJFJH_08290 - hypothetical protein, at 1,712,012 to 1,713,100
_08290
Position (kb) 1710
1711
1712 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 1710.143 kb on + strand, within OLJFJH_08270 at 1710.180 kb on + strand, within OLJFJH_08270 at 1710.181 kb on - strand, within OLJFJH_08270 at 1710.283 kb on + strand, within OLJFJH_08270 at 1710.437 kb on + strand, within OLJFJH_08270 at 1710.750 kb on + strand at 1710.778 kb on + strand at 1710.849 kb on + strand at 1710.977 kb on + strand at 1711.234 kb on + strand, within OLJFJH_08275 at 1711.234 kb on + strand, within OLJFJH_08275 at 1711.238 kb on + strand, within OLJFJH_08275 at 1711.330 kb on - strand at 1711.382 kb on + strand at 1711.387 kb on - strand at 1711.387 kb on - strand at 1711.389 kb on + strand at 1711.420 kb on - strand at 1711.420 kb on - strand at 1711.641 kb on + strand, within OLJFJH_08280 at 1711.641 kb on + strand, within OLJFJH_08280 at 1711.641 kb on + strand, within OLJFJH_08280 at 1711.641 kb on + strand, within OLJFJH_08280 at 1711.642 kb on - strand, within OLJFJH_08280 at 1711.642 kb on - strand, within OLJFJH_08280 at 1711.691 kb on + strand at 1711.793 kb on - strand, within OLJFJH_08285 at 1711.922 kb on + strand, within OLJFJH_08285 at 1711.922 kb on + strand, within OLJFJH_08285 at 1711.922 kb on + strand, within OLJFJH_08285 at 1711.923 kb on - strand, within OLJFJH_08285 at 1711.923 kb on - strand, within OLJFJH_08285
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-7 remove 1,710,143 + OLJFJH_08270 0.72 -1.1 1,710,180 + OLJFJH_08270 0.73 +1.3 1,710,181 - OLJFJH_08270 0.73 -0.3 1,710,283 + OLJFJH_08270 0.77 +2.6 1,710,437 + OLJFJH_08270 0.82 -0.0 1,710,750 + +2.9 1,710,778 + +0.5 1,710,849 + +0.6 1,710,977 + +0.4 1,711,234 + OLJFJH_08275 0.69 -1.1 1,711,234 + OLJFJH_08275 0.69 -0.9 1,711,238 + OLJFJH_08275 0.70 -1.1 1,711,330 - +3.8 1,711,382 + -0.3 1,711,387 - +0.8 1,711,387 - -0.5 1,711,389 + +0.5 1,711,420 - +1.1 1,711,420 - -0.2 1,711,641 + OLJFJH_08280 0.79 -2.1 1,711,641 + OLJFJH_08280 0.79 +1.4 1,711,641 + OLJFJH_08280 0.79 -1.4 1,711,641 + OLJFJH_08280 0.79 -2.0 1,711,642 - OLJFJH_08280 0.80 +0.1 1,711,642 - OLJFJH_08280 0.80 -0.8 1,711,691 + +4.0 1,711,793 - OLJFJH_08285 0.34 -0.6 1,711,922 + OLJFJH_08285 0.81 -1.2 1,711,922 + OLJFJH_08285 0.81 +0.2 1,711,922 + OLJFJH_08285 0.81 -0.6 1,711,923 - OLJFJH_08285 0.81 +0.5 1,711,923 - OLJFJH_08285 0.81 -0.1
Or see this region's nucleotide sequence