Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07440 and OLJFJH_07445 are separated by 204 nucleotides OLJFJH_07445 and OLJFJH_07450 overlap by 4 nucleotides OLJFJH_07450 and OLJFJH_07455 are separated by 4 nucleotides OLJFJH_07455 and OLJFJH_07460 overlap by 1 nucleotides
OLJFJH_07440: OLJFJH_07440 - restriction endonuclease, at 1,523,980 to 1,524,801
_07440
OLJFJH_07445: OLJFJH_07445 - class I SAM-dependent methyltransferase, at 1,525,006 to 1,525,524
_07445
OLJFJH_07450: OLJFJH_07450 - hypothetical protein, at 1,525,521 to 1,526,351
_07450
OLJFJH_07455: OLJFJH_07455 - DNA sulfur modification protein DndE, at 1,526,356 to 1,526,709
_07455
OLJFJH_07460: OLJFJH_07460 - DNA sulfur modification protein DndD, at 1,526,709 to 1,528,709
_07460
Position (kb) 1525
1526
1527 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8
9
10 at 1524.693 kb on - strand, within OLJFJH_07440 at 1524.870 kb on + strand at 1524.936 kb on + strand at 1525.015 kb on - strand at 1525.017 kb on - strand at 1525.749 kb on - strand, within OLJFJH_07450 at 1525.782 kb on - strand, within OLJFJH_07450 at 1525.801 kb on - strand, within OLJFJH_07450 at 1526.012 kb on - strand, within OLJFJH_07450 at 1526.358 kb on - strand at 1526.358 kb on - strand at 1526.768 kb on + strand at 1526.768 kb on + strand at 1526.769 kb on - strand at 1526.893 kb on + strand at 1526.909 kb on + strand, within OLJFJH_07460 at 1526.909 kb on + strand, within OLJFJH_07460 at 1526.955 kb on - strand, within OLJFJH_07460 at 1526.997 kb on + strand, within OLJFJH_07460 at 1527.010 kb on + strand, within OLJFJH_07460 at 1527.256 kb on + strand, within OLJFJH_07460
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-7 remove 1,524,693 - OLJFJH_07440 0.87 +0.7 1,524,870 + +0.2 1,524,936 + -0.9 1,525,015 - +0.8 1,525,017 - -0.6 1,525,749 - OLJFJH_07450 0.27 -1.7 1,525,782 - OLJFJH_07450 0.31 -1.1 1,525,801 - OLJFJH_07450 0.34 -1.3 1,526,012 - OLJFJH_07450 0.59 -1.9 1,526,358 - +1.0 1,526,358 - +10.6 1,526,768 + +1.5 1,526,768 + -2.6 1,526,769 - -0.4 1,526,893 + -1.2 1,526,909 + OLJFJH_07460 0.10 -0.6 1,526,909 + OLJFJH_07460 0.10 -1.0 1,526,955 - OLJFJH_07460 0.12 -0.1 1,526,997 + OLJFJH_07460 0.14 +0.0 1,527,010 + OLJFJH_07460 0.15 +0.0 1,527,256 + OLJFJH_07460 0.27 -0.2
Or see this region's nucleotide sequence