Strain Fitness in Erwinia amylovora T8 around OLJFJH_07060

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
1,442,341	+		OLJFJH_07055	0.10	+1.7
1,442,341	+		OLJFJH_07055	0.10	+0.2
1,442,341	+		OLJFJH_07055	0.10	-1.1
1,442,342	-		OLJFJH_07055	0.10	-2.0
1,442,342	-		OLJFJH_07055	0.10	-1.2
1,442,342	-		OLJFJH_07055	0.10	-0.5
1,442,342	-		OLJFJH_07055	0.10	-1.2
1,442,342	-		OLJFJH_07055	0.10	-0.3
1,442,342	-		OLJFJH_07055	0.10	-0.5
1,442,342	-		OLJFJH_07055	0.10	-1.7
1,442,342	-		OLJFJH_07055	0.10	-1.9
1,442,343	+		OLJFJH_07055	0.10	-0.4
1,442,343	+		OLJFJH_07055	0.10	-1.3
1,442,343	+		OLJFJH_07055	0.10	-2.4
1,442,343	+		OLJFJH_07055	0.10	+0.2
1,442,344	-		OLJFJH_07055	0.10	-1.3
1,442,344	-		OLJFJH_07055	0.10	+0.1
1,442,344	-		OLJFJH_07055	0.10	-0.6
1,442,344	-		OLJFJH_07055	0.10	-0.2
1,442,346	-		OLJFJH_07055	0.11	-0.1
1,442,360	-		OLJFJH_07055	0.12	-0.3
1,442,391	+		OLJFJH_07055	0.16	+0.4
1,442,392	-		OLJFJH_07055	0.16	-1.6
1,442,436	+		OLJFJH_07055	0.21	+0.5
1,442,436	+		OLJFJH_07055	0.21	-2.1
1,442,437	-		OLJFJH_07055	0.21	-0.9
1,442,455	+		OLJFJH_07055	0.23	-0.5
1,442,456	-		OLJFJH_07055	0.24	+0.1
1,442,473	+		OLJFJH_07055	0.25	-2.3
1,442,624	+		OLJFJH_07055	0.43	-1.2
1,442,704	+		OLJFJH_07055	0.53	-0.9
1,442,705	-		OLJFJH_07055	0.53	-2.2
1,442,913	-		OLJFJH_07055	0.77	+0.2
1,442,936	-		OLJFJH_07055	0.80	-1.5
1,442,948	-		OLJFJH_07055	0.81	-0.9
1,443,006	-		OLJFJH_07055	0.88	-2.7
1,443,006	-		OLJFJH_07055	0.88	-2.7
1,443,006	-		OLJFJH_07055	0.88	-1.0
1,443,014	+		OLJFJH_07055	0.89	+2.7
1,443,031	-				-1.5
1,443,041	-				-1.7
1,443,041	-				-2.0
1,443,111	+				-1.0
1,443,111	+				-1.1
1,443,111	+				+0.1
1,443,265	+				+0.8
1,443,290	-				+1.9
1,443,290	-				+1.7
1,443,290	-				-0.1
1,443,338	+				-1.4
1,443,436	-		OLJFJH_07060	0.27	-1.2
1,443,535	+		OLJFJH_07060	0.48	-1.2
1,443,549	+		OLJFJH_07060	0.51	-2.2
1,443,550	-		OLJFJH_07060	0.51	-2.1
1,443,551	-		OLJFJH_07060	0.51	-2.6
1,443,559	+		OLJFJH_07060	0.53	-1.0
1,443,560	-		OLJFJH_07060	0.53	-0.5
1,443,628	-		OLJFJH_07060	0.67	-0.9
1,443,718	+		OLJFJH_07060	0.86	-0.8
1,443,718	+		OLJFJH_07060	0.86	-0.8
1,443,719	-		OLJFJH_07060	0.86	-3.1
1,443,719	-		OLJFJH_07060	0.86	-0.6
1,443,719	-		OLJFJH_07060	0.86	-0.9
1,443,719	-		OLJFJH_07060	0.86	-1.2
1,443,796	+				-0.5
1,443,797	-				+0.4
1,443,797	-				+0.8
1,443,797	-				-1.3
1,443,797	-				-1.4
1,443,846	-				+0.0
1,443,846	-				+1.4
1,443,965	+				-2.2
1,443,966	-				-2.2
1,443,988	-				-1.0
1,444,040	+		OLJFJH_07065	0.26	-0.6
1,444,040	+		OLJFJH_07065	0.26	+0.1
1,444,040	+		OLJFJH_07065	0.26	-0.5
1,444,041	-		OLJFJH_07065	0.27	+0.2
1,444,041	-		OLJFJH_07065	0.27	+0.5
1,444,045	-		OLJFJH_07065	0.28	-0.6
1,444,045	-		OLJFJH_07065	0.28	-1.1
1,444,045	-		OLJFJH_07065	0.28	-0.3
1,444,050	+		OLJFJH_07065	0.30	-1.3
1,444,050	+		OLJFJH_07065	0.30	-0.6
1,444,084	+		OLJFJH_07065	0.42	-2.0
1,444,085	-		OLJFJH_07065	0.42	-0.6
1,444,129	+		OLJFJH_07065	0.57	+1.7
1,444,139	+		OLJFJH_07065	0.61	-0.4
1,444,139	+		OLJFJH_07065	0.61	-1.0
1,444,140	-		OLJFJH_07065	0.61	-0.9
1,444,140	-		OLJFJH_07065	0.61	+0.2
1,444,140	-		OLJFJH_07065	0.61	-0.3
1,444,140	-		OLJFJH_07065	0.61	-1.5
1,444,140	-		OLJFJH_07065	0.61	-0.1
1,444,140	-		OLJFJH_07065	0.61	-0.6
1,444,140	-		OLJFJH_07065	0.61	+0.3
1,444,164	-		OLJFJH_07065	0.69	+0.6
1,444,354	+				-2.6
1,444,355	-				-0.8
1,444,382	+				-0.8
1,444,428	-		OLJFJH_07070	0.11	-1.0
1,444,543	-		OLJFJH_07070	0.19	+1.0
1,444,567	+		OLJFJH_07070	0.20	-1.9
1,444,567	+		OLJFJH_07070	0.20	-1.2
1,444,601	-		OLJFJH_07070	0.23	+0.1