Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_06780 and OLJFJH_06785 are separated by 14 nucleotides OLJFJH_06785 and OLJFJH_06790 are separated by 619 nucleotides
OLJFJH_06780: OLJFJH_06780 - phosphoribosylamine--glycine ligase, at 1,376,848 to 1,378,128
_06780
OLJFJH_06785: OLJFJH_06785 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 1,378,143 to 1,379,732
_06785
OLJFJH_06790: OLJFJH_06790 - 16S ribosomal RNA, at 1,380,352 to 1,381,891
_06790
Position (kb)
1378
1379
1380 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1377.177 kb on + strand, within OLJFJH_06780 at 1377.177 kb on + strand, within OLJFJH_06780 at 1377.178 kb on - strand, within OLJFJH_06780 at 1377.267 kb on + strand, within OLJFJH_06780 at 1377.268 kb on - strand, within OLJFJH_06780 at 1377.268 kb on - strand, within OLJFJH_06780 at 1377.332 kb on + strand, within OLJFJH_06780 at 1377.332 kb on + strand, within OLJFJH_06780 at 1377.332 kb on + strand, within OLJFJH_06780 at 1377.332 kb on + strand, within OLJFJH_06780 at 1377.333 kb on - strand, within OLJFJH_06780 at 1377.333 kb on - strand, within OLJFJH_06780 at 1377.333 kb on - strand, within OLJFJH_06780 at 1377.432 kb on - strand, within OLJFJH_06780 at 1377.432 kb on - strand, within OLJFJH_06780 at 1377.618 kb on + strand, within OLJFJH_06780 at 1377.618 kb on + strand, within OLJFJH_06780 at 1377.618 kb on + strand, within OLJFJH_06780 at 1377.618 kb on + strand, within OLJFJH_06780 at 1377.618 kb on + strand, within OLJFJH_06780 at 1377.618 kb on + strand, within OLJFJH_06780 at 1377.619 kb on - strand, within OLJFJH_06780 at 1377.697 kb on - strand, within OLJFJH_06780 at 1377.724 kb on + strand, within OLJFJH_06780 at 1377.724 kb on + strand, within OLJFJH_06780 at 1377.724 kb on + strand, within OLJFJH_06780 at 1377.728 kb on + strand, within OLJFJH_06780 at 1377.728 kb on + strand, within OLJFJH_06780 at 1377.728 kb on + strand, within OLJFJH_06780 at 1377.728 kb on + strand, within OLJFJH_06780 at 1377.729 kb on - strand, within OLJFJH_06780 at 1378.045 kb on + strand at 1378.045 kb on + strand at 1378.118 kb on - strand at 1378.144 kb on + strand at 1378.378 kb on + strand, within OLJFJH_06785 at 1378.419 kb on - strand, within OLJFJH_06785 at 1378.545 kb on + strand, within OLJFJH_06785 at 1378.545 kb on + strand, within OLJFJH_06785 at 1378.713 kb on + strand, within OLJFJH_06785 at 1378.713 kb on + strand, within OLJFJH_06785 at 1378.810 kb on + strand, within OLJFJH_06785 at 1378.909 kb on - strand, within OLJFJH_06785 at 1378.946 kb on + strand, within OLJFJH_06785 at 1378.946 kb on + strand, within OLJFJH_06785 at 1378.946 kb on + strand, within OLJFJH_06785 at 1378.946 kb on + strand, within OLJFJH_06785 at 1378.947 kb on - strand, within OLJFJH_06785 at 1378.947 kb on - strand, within OLJFJH_06785 at 1378.948 kb on + strand, within OLJFJH_06785 at 1378.948 kb on + strand, within OLJFJH_06785 at 1378.948 kb on + strand, within OLJFJH_06785 at 1379.013 kb on + strand, within OLJFJH_06785 at 1379.013 kb on + strand, within OLJFJH_06785 at 1379.013 kb on + strand, within OLJFJH_06785 at 1379.013 kb on + strand, within OLJFJH_06785 at 1379.013 kb on + strand, within OLJFJH_06785 at 1379.013 kb on + strand, within OLJFJH_06785 at 1379.014 kb on - strand, within OLJFJH_06785 at 1379.014 kb on - strand, within OLJFJH_06785 at 1379.014 kb on - strand, within OLJFJH_06785 at 1379.015 kb on + strand, within OLJFJH_06785 at 1379.017 kb on + strand, within OLJFJH_06785 at 1379.017 kb on + strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.018 kb on - strand, within OLJFJH_06785 at 1379.050 kb on + strand, within OLJFJH_06785 at 1379.073 kb on - strand, within OLJFJH_06785 at 1379.155 kb on + strand, within OLJFJH_06785 at 1379.156 kb on - strand, within OLJFJH_06785 at 1379.156 kb on - strand, within OLJFJH_06785 at 1379.156 kb on - strand, within OLJFJH_06785 at 1379.168 kb on + strand, within OLJFJH_06785 at 1379.168 kb on + strand, within OLJFJH_06785 at 1379.169 kb on - strand, within OLJFJH_06785 at 1379.169 kb on - strand, within OLJFJH_06785 at 1379.169 kb on - strand, within OLJFJH_06785 at 1379.309 kb on + strand, within OLJFJH_06785 at 1379.310 kb on - strand, within OLJFJH_06785 at 1379.310 kb on - strand, within OLJFJH_06785 at 1379.435 kb on + strand, within OLJFJH_06785 at 1379.435 kb on + strand, within OLJFJH_06785 at 1379.493 kb on + strand, within OLJFJH_06785 at 1379.521 kb on - strand, within OLJFJH_06785 at 1379.564 kb on - strand, within OLJFJH_06785 at 1379.724 kb on + strand at 1379.724 kb on + strand at 1379.724 kb on + strand at 1379.724 kb on + strand at 1379.725 kb on - strand at 1379.725 kb on - strand at 1379.775 kb on + strand at 1379.798 kb on + strand at 1379.799 kb on - strand at 1379.799 kb on - strand at 1379.935 kb on + strand at 1379.938 kb on - strand at 1379.938 kb on - strand at 1379.975 kb on + strand at 1379.976 kb on - strand at 1379.976 kb on - strand at 1379.989 kb on - strand at 1380.017 kb on - strand at 1380.017 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-7 remove 1,377,177 + OLJFJH_06780 0.26 -2.4 1,377,177 + OLJFJH_06780 0.26 -4.0 1,377,178 - OLJFJH_06780 0.26 -2.7 1,377,267 + OLJFJH_06780 0.33 -2.8 1,377,268 - OLJFJH_06780 0.33 -4.2 1,377,268 - OLJFJH_06780 0.33 -0.4 1,377,332 + OLJFJH_06780 0.38 -0.4 1,377,332 + OLJFJH_06780 0.38 -2.0 1,377,332 + OLJFJH_06780 0.38 -3.5 1,377,332 + OLJFJH_06780 0.38 -3.2 1,377,333 - OLJFJH_06780 0.38 -2.2 1,377,333 - OLJFJH_06780 0.38 -4.1 1,377,333 - OLJFJH_06780 0.38 -4.1 1,377,432 - OLJFJH_06780 0.46 -3.2 1,377,432 - OLJFJH_06780 0.46 -2.1 1,377,618 + OLJFJH_06780 0.60 -1.8 1,377,618 + OLJFJH_06780 0.60 -2.7 1,377,618 + OLJFJH_06780 0.60 -5.1 1,377,618 + OLJFJH_06780 0.60 -2.3 1,377,618 + OLJFJH_06780 0.60 -5.2 1,377,618 + OLJFJH_06780 0.60 -4.0 1,377,619 - OLJFJH_06780 0.60 +0.4 1,377,697 - OLJFJH_06780 0.66 -0.4 1,377,724 + OLJFJH_06780 0.68 -5.6 1,377,724 + OLJFJH_06780 0.68 -3.4 1,377,724 + OLJFJH_06780 0.68 -2.0 1,377,728 + OLJFJH_06780 0.69 -2.9 1,377,728 + OLJFJH_06780 0.69 -4.4 1,377,728 + OLJFJH_06780 0.69 -2.9 1,377,728 + OLJFJH_06780 0.69 -2.9 1,377,729 - OLJFJH_06780 0.69 -3.1 1,378,045 + -3.3 1,378,045 + -0.2 1,378,118 - -2.9 1,378,144 + -3.4 1,378,378 + OLJFJH_06785 0.15 -0.8 1,378,419 - OLJFJH_06785 0.17 -1.9 1,378,545 + OLJFJH_06785 0.25 -0.4 1,378,545 + OLJFJH_06785 0.25 -3.8 1,378,713 + OLJFJH_06785 0.36 -1.3 1,378,713 + OLJFJH_06785 0.36 -3.7 1,378,810 + OLJFJH_06785 0.42 -4.0 1,378,909 - OLJFJH_06785 0.48 -1.1 1,378,946 + OLJFJH_06785 0.51 -0.2 1,378,946 + OLJFJH_06785 0.51 -4.2 1,378,946 + OLJFJH_06785 0.51 -3.0 1,378,946 + OLJFJH_06785 0.51 -2.1 1,378,947 - OLJFJH_06785 0.51 -3.7 1,378,947 - OLJFJH_06785 0.51 -5.0 1,378,948 + OLJFJH_06785 0.51 -2.9 1,378,948 + OLJFJH_06785 0.51 -4.8 1,378,948 + OLJFJH_06785 0.51 -2.6 1,379,013 + OLJFJH_06785 0.55 +0.2 1,379,013 + OLJFJH_06785 0.55 -5.0 1,379,013 + OLJFJH_06785 0.55 -4.8 1,379,013 + OLJFJH_06785 0.55 -1.9 1,379,013 + OLJFJH_06785 0.55 -0.0 1,379,013 + OLJFJH_06785 0.55 -3.2 1,379,014 - OLJFJH_06785 0.55 -1.6 1,379,014 - OLJFJH_06785 0.55 -5.0 1,379,014 - OLJFJH_06785 0.55 -3.4 1,379,015 + OLJFJH_06785 0.55 -3.4 1,379,017 + OLJFJH_06785 0.55 -4.3 1,379,017 + OLJFJH_06785 0.55 -1.8 1,379,018 - OLJFJH_06785 0.55 -4.0 1,379,018 - OLJFJH_06785 0.55 -5.4 1,379,018 - OLJFJH_06785 0.55 -4.6 1,379,018 - OLJFJH_06785 0.55 -3.6 1,379,018 - OLJFJH_06785 0.55 -4.7 1,379,018 - OLJFJH_06785 0.55 -3.1 1,379,018 - OLJFJH_06785 0.55 -4.0 1,379,018 - OLJFJH_06785 0.55 -1.3 1,379,050 + OLJFJH_06785 0.57 -2.4 1,379,073 - OLJFJH_06785 0.58 +0.2 1,379,155 + OLJFJH_06785 0.64 -2.0 1,379,156 - OLJFJH_06785 0.64 +0.2 1,379,156 - OLJFJH_06785 0.64 -4.7 1,379,156 - OLJFJH_06785 0.64 -4.4 1,379,168 + OLJFJH_06785 0.64 -3.4 1,379,168 + OLJFJH_06785 0.64 -4.1 1,379,169 - OLJFJH_06785 0.65 -4.4 1,379,169 - OLJFJH_06785 0.65 -1.8 1,379,169 - OLJFJH_06785 0.65 -4.2 1,379,309 + OLJFJH_06785 0.73 -3.2 1,379,310 - OLJFJH_06785 0.73 -3.9 1,379,310 - OLJFJH_06785 0.73 -2.2 1,379,435 + OLJFJH_06785 0.81 -4.7 1,379,435 + OLJFJH_06785 0.81 -0.8 1,379,493 + OLJFJH_06785 0.85 -0.0 1,379,521 - OLJFJH_06785 0.87 -3.5 1,379,564 - OLJFJH_06785 0.89 -4.6 1,379,724 + -4.3 1,379,724 + -3.3 1,379,724 + -4.4 1,379,724 + -1.2 1,379,725 - -1.4 1,379,725 - -1.2 1,379,775 + -3.1 1,379,798 + +0.4 1,379,799 - +1.0 1,379,799 - +0.9 1,379,935 + +0.1 1,379,938 - +0.0 1,379,938 - -0.8 1,379,975 + -0.1 1,379,976 - -0.5 1,379,976 - +1.7 1,379,989 - -1.2 1,380,017 - -0.5 1,380,017 - -0.2
Or see this region's nucleotide sequence