Strain Fitness in Erwinia amylovora T8 around OLJFJH_06055

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
1,216,759	+		OLJFJH_06045	0.79	+0.8
1,216,760	-		OLJFJH_06045	0.79	+0.7
1,216,863	+				+0.6
1,216,864	-				-0.4
1,216,908	-				+1.9
1,217,001	-				+0.5
1,217,184	+				+0.1
1,217,269	+				+1.5
1,217,270	-				+0.4
1,217,274	-				+0.0
1,217,274	-				+0.4
1,217,274	-				+1.0
1,217,365	-				-0.5
1,217,368	+				-1.6
1,217,368	+				+1.0
1,217,368	+				-0.7
1,217,408	+		OLJFJH_06050	0.15	+0.1
1,217,408	+		OLJFJH_06050	0.15	+1.1
1,217,626	-				+0.4
1,217,626	-				+0.6
1,217,741	-		OLJFJH_06055	0.11	-2.0
1,217,741	-		OLJFJH_06055	0.11	-0.9
1,218,139	+				-0.1
1,218,139	+				+0.4
1,218,139	+				-0.1
1,218,140	-				+1.3
1,218,140	-				+0.1
1,218,140	-				+0.4
1,218,161	+				+0.4
1,218,161	+				+1.2
1,218,161	+				+2.8
1,218,161	+				-1.3
1,218,162	-				-1.0
1,218,162	-				-0.7
1,218,166	+				+2.7
1,218,166	+				+0.5
1,218,167	-				-0.9
1,218,174	-				+0.6
1,218,204	+				+1.0
1,218,204	+				+2.5
1,218,208	+				+0.5
1,218,208	+				+1.3
1,218,209	-				-0.8
1,218,209	-				+1.0
1,218,248	+				+1.0
1,218,347	+				+0.5
1,218,355	-				+0.5
1,218,427	+				+0.1
1,218,462	+				+1.5
1,218,462	+				-0.1
1,218,463	-				-0.1
1,218,635	-		OLJFJH_06060	0.21	+0.0
1,218,676	+		OLJFJH_06060	0.24	+0.0
1,218,676	+		OLJFJH_06060	0.24	-0.7
1,218,676	+		OLJFJH_06060	0.24	-0.1
1,218,676	+		OLJFJH_06060	0.24	-1.7
1,218,677	-		OLJFJH_06060	0.24	-0.2
1,218,677	-		OLJFJH_06060	0.24	+0.9
1,218,689	+		OLJFJH_06060	0.25	+2.1
1,218,773	-		OLJFJH_06060	0.32	+0.3
1,218,781	+		OLJFJH_06060	0.32	-1.4