Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04610 and OLJFJH_04615 are separated by 130 nucleotides OLJFJH_04615 and OLJFJH_04620 are separated by 111 nucleotides OLJFJH_04620 and OLJFJH_04625 overlap by 4 nucleotides OLJFJH_04625 and OLJFJH_04630 are separated by 60 nucleotides
OLJFJH_04610: OLJFJH_04610 - TIGR00645 family protein, at 899,385 to 899,882
_04610
OLJFJH_04615: OLJFJH_04615 - hypothetical protein, at 900,013 to 900,225
_04615
OLJFJH_04620: OLJFJH_04620 - Inversin, at 900,337 to 901,077
_04620
OLJFJH_04625: OLJFJH_04625 - hypothetical protein, at 901,074 to 901,310
_04625
OLJFJH_04630: OLJFJH_04630 - phospholipase, at 901,371 to 902,147
_04630
Position (kb)
900
901
902 Strain fitness (log2 ratio)
-1
0
1 at 899.388 kb on + strand at 899.467 kb on + strand, within OLJFJH_04610 at 899.467 kb on + strand, within OLJFJH_04610 at 899.468 kb on - strand, within OLJFJH_04610 at 899.468 kb on - strand, within OLJFJH_04610 at 899.507 kb on + strand, within OLJFJH_04610 at 899.508 kb on - strand, within OLJFJH_04610 at 899.664 kb on + strand, within OLJFJH_04610 at 899.721 kb on + strand, within OLJFJH_04610 at 899.769 kb on + strand, within OLJFJH_04610 at 899.770 kb on - strand, within OLJFJH_04610 at 899.786 kb on + strand, within OLJFJH_04610 at 899.786 kb on + strand, within OLJFJH_04610 at 899.787 kb on - strand, within OLJFJH_04610 at 899.824 kb on + strand, within OLJFJH_04610 at 899.824 kb on + strand, within OLJFJH_04610 at 899.825 kb on - strand, within OLJFJH_04610 at 899.825 kb on - strand, within OLJFJH_04610 at 899.825 kb on - strand, within OLJFJH_04610 at 899.854 kb on + strand at 899.854 kb on + strand at 899.917 kb on - strand at 899.917 kb on - strand at 900.055 kb on - strand, within OLJFJH_04615 at 900.129 kb on - strand, within OLJFJH_04615 at 900.131 kb on - strand, within OLJFJH_04615 at 900.203 kb on + strand, within OLJFJH_04615 at 900.204 kb on - strand at 900.212 kb on + strand at 900.925 kb on + strand, within OLJFJH_04620 at 901.125 kb on - strand, within OLJFJH_04625 at 901.125 kb on - strand, within OLJFJH_04625 at 901.161 kb on + strand, within OLJFJH_04625 at 901.484 kb on + strand, within OLJFJH_04630 at 901.575 kb on - strand, within OLJFJH_04630 at 901.690 kb on - strand, within OLJFJH_04630 at 901.690 kb on - strand, within OLJFJH_04630 at 901.698 kb on - strand, within OLJFJH_04630 at 901.904 kb on + strand, within OLJFJH_04630 at 901.904 kb on + strand, within OLJFJH_04630 at 901.938 kb on - strand, within OLJFJH_04630 at 902.012 kb on - strand, within OLJFJH_04630
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-7 remove 899,388 + -1.0 899,467 + OLJFJH_04610 0.16 +0.3 899,467 + OLJFJH_04610 0.16 +0.5 899,468 - OLJFJH_04610 0.17 -0.5 899,468 - OLJFJH_04610 0.17 -1.3 899,507 + OLJFJH_04610 0.24 +0.1 899,508 - OLJFJH_04610 0.25 -0.6 899,664 + OLJFJH_04610 0.56 -0.2 899,721 + OLJFJH_04610 0.67 -0.7 899,769 + OLJFJH_04610 0.77 +0.2 899,770 - OLJFJH_04610 0.77 -1.2 899,786 + OLJFJH_04610 0.81 +0.5 899,786 + OLJFJH_04610 0.81 +1.3 899,787 - OLJFJH_04610 0.81 -0.3 899,824 + OLJFJH_04610 0.88 -0.3 899,824 + OLJFJH_04610 0.88 -0.3 899,825 - OLJFJH_04610 0.88 +0.6 899,825 - OLJFJH_04610 0.88 +0.5 899,825 - OLJFJH_04610 0.88 -0.1 899,854 + -0.7 899,854 + -0.4 899,917 - -1.3 899,917 - -0.5 900,055 - OLJFJH_04615 0.20 -1.2 900,129 - OLJFJH_04615 0.54 -1.0 900,131 - OLJFJH_04615 0.55 -0.3 900,203 + OLJFJH_04615 0.89 -0.2 900,204 - -0.0 900,212 + +1.5 900,925 + OLJFJH_04620 0.79 -1.3 901,125 - OLJFJH_04625 0.22 -0.8 901,125 - OLJFJH_04625 0.22 +0.5 901,161 + OLJFJH_04625 0.37 -1.4 901,484 + OLJFJH_04630 0.15 -0.3 901,575 - OLJFJH_04630 0.26 +1.3 901,690 - OLJFJH_04630 0.41 -0.8 901,690 - OLJFJH_04630 0.41 +0.2 901,698 - OLJFJH_04630 0.42 +0.2 901,904 + OLJFJH_04630 0.69 +0.2 901,904 + OLJFJH_04630 0.69 -0.3 901,938 - OLJFJH_04630 0.73 -0.8 902,012 - OLJFJH_04630 0.82 -0.6
Or see this region's nucleotide sequence