Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03255 and OLJFJH_03260 are separated by 81 nucleotides OLJFJH_03260 and OLJFJH_03265 are separated by 138 nucleotides
OLJFJH_03255: OLJFJH_03255 - LysR family transcriptional regulator, at 611,331 to 612,236
_03255
OLJFJH_03260: OLJFJH_03260 - translation factor (SUA5), at 612,318 to 613,097
_03260
OLJFJH_03265: OLJFJH_03265 - NAD-dependent dehydratase, at 613,236 to 614,306
_03265
Position (kb) 612
613
614 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 611.395 kb on - strand at 611.465 kb on - strand, within OLJFJH_03255 at 611.465 kb on - strand, within OLJFJH_03255 at 611.532 kb on + strand, within OLJFJH_03255 at 611.532 kb on + strand, within OLJFJH_03255 at 611.533 kb on - strand, within OLJFJH_03255 at 611.535 kb on + strand, within OLJFJH_03255 at 611.536 kb on - strand, within OLJFJH_03255 at 611.835 kb on + strand, within OLJFJH_03255 at 611.835 kb on + strand, within OLJFJH_03255 at 611.836 kb on - strand, within OLJFJH_03255 at 611.836 kb on - strand, within OLJFJH_03255 at 611.850 kb on + strand, within OLJFJH_03255 at 611.890 kb on + strand, within OLJFJH_03255 at 611.933 kb on + strand, within OLJFJH_03255 at 611.933 kb on + strand, within OLJFJH_03255 at 611.934 kb on - strand, within OLJFJH_03255 at 611.934 kb on - strand, within OLJFJH_03255 at 611.934 kb on - strand, within OLJFJH_03255 at 612.055 kb on + strand, within OLJFJH_03255 at 612.063 kb on + strand, within OLJFJH_03255 at 612.064 kb on - strand, within OLJFJH_03255 at 612.064 kb on - strand, within OLJFJH_03255 at 612.132 kb on + strand, within OLJFJH_03255 at 612.132 kb on + strand, within OLJFJH_03255 at 612.133 kb on - strand, within OLJFJH_03255 at 612.134 kb on + strand, within OLJFJH_03255 at 612.141 kb on + strand, within OLJFJH_03255 at 612.141 kb on + strand, within OLJFJH_03255 at 612.214 kb on + strand at 612.319 kb on + strand at 612.319 kb on + strand at 612.325 kb on + strand at 612.325 kb on + strand at 612.331 kb on - strand at 612.539 kb on + strand, within OLJFJH_03260 at 612.539 kb on + strand, within OLJFJH_03260 at 612.540 kb on - strand, within OLJFJH_03260 at 612.540 kb on - strand, within OLJFJH_03260 at 612.540 kb on - strand, within OLJFJH_03260 at 612.540 kb on - strand, within OLJFJH_03260 at 612.544 kb on + strand, within OLJFJH_03260 at 612.544 kb on + strand, within OLJFJH_03260 at 612.545 kb on - strand, within OLJFJH_03260 at 612.545 kb on - strand, within OLJFJH_03260 at 612.545 kb on - strand, within OLJFJH_03260 at 612.993 kb on - strand, within OLJFJH_03260 at 612.994 kb on + strand, within OLJFJH_03260 at 612.994 kb on + strand, within OLJFJH_03260 at 612.995 kb on - strand, within OLJFJH_03260 at 612.995 kb on - strand, within OLJFJH_03260 at 612.995 kb on - strand, within OLJFJH_03260 at 612.995 kb on - strand, within OLJFJH_03260 at 613.048 kb on - strand at 613.063 kb on - strand at 613.063 kb on - strand at 613.238 kb on - strand at 613.250 kb on + strand at 613.433 kb on - strand, within OLJFJH_03265 at 613.569 kb on + strand, within OLJFJH_03265 at 613.570 kb on - strand, within OLJFJH_03265 at 613.589 kb on + strand, within OLJFJH_03265 at 613.590 kb on - strand, within OLJFJH_03265 at 613.591 kb on + strand, within OLJFJH_03265 at 613.592 kb on - strand, within OLJFJH_03265 at 613.592 kb on - strand, within OLJFJH_03265 at 613.742 kb on - strand, within OLJFJH_03265 at 613.831 kb on + strand, within OLJFJH_03265 at 613.832 kb on - strand, within OLJFJH_03265 at 613.832 kb on - strand, within OLJFJH_03265 at 613.832 kb on - strand, within OLJFJH_03265 at 613.870 kb on + strand, within OLJFJH_03265 at 613.870 kb on + strand, within OLJFJH_03265 at 613.870 kb on + strand, within OLJFJH_03265 at 613.871 kb on - strand, within OLJFJH_03265 at 613.871 kb on - strand, within OLJFJH_03265 at 613.873 kb on + strand, within OLJFJH_03265 at 613.873 kb on + strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.964 kb on - strand, within OLJFJH_03265
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-7 remove 611,395 - +0.8 611,465 - OLJFJH_03255 0.15 -1.7 611,465 - OLJFJH_03255 0.15 +1.3 611,532 + OLJFJH_03255 0.22 +1.0 611,532 + OLJFJH_03255 0.22 +0.5 611,533 - OLJFJH_03255 0.22 -1.1 611,535 + OLJFJH_03255 0.23 -0.1 611,536 - OLJFJH_03255 0.23 -0.5 611,835 + OLJFJH_03255 0.56 -0.5 611,835 + OLJFJH_03255 0.56 -1.2 611,836 - OLJFJH_03255 0.56 -0.8 611,836 - OLJFJH_03255 0.56 -1.6 611,850 + OLJFJH_03255 0.57 -0.8 611,890 + OLJFJH_03255 0.62 -1.0 611,933 + OLJFJH_03255 0.66 -0.9 611,933 + OLJFJH_03255 0.66 -1.5 611,934 - OLJFJH_03255 0.67 +0.0 611,934 - OLJFJH_03255 0.67 -0.7 611,934 - OLJFJH_03255 0.67 +0.2 612,055 + OLJFJH_03255 0.80 +0.2 612,063 + OLJFJH_03255 0.81 -1.3 612,064 - OLJFJH_03255 0.81 +0.1 612,064 - OLJFJH_03255 0.81 -2.1 612,132 + OLJFJH_03255 0.88 -0.5 612,132 + OLJFJH_03255 0.88 -0.8 612,133 - OLJFJH_03255 0.89 -1.1 612,134 + OLJFJH_03255 0.89 -0.4 612,141 + OLJFJH_03255 0.89 +0.0 612,141 + OLJFJH_03255 0.89 +0.3 612,214 + +0.1 612,319 + +0.2 612,319 + -0.6 612,325 + -1.0 612,325 + -0.4 612,331 - -0.5 612,539 + OLJFJH_03260 0.28 -0.3 612,539 + OLJFJH_03260 0.28 -0.8 612,540 - OLJFJH_03260 0.28 -2.9 612,540 - OLJFJH_03260 0.28 -2.1 612,540 - OLJFJH_03260 0.28 +2.9 612,540 - OLJFJH_03260 0.28 -2.0 612,544 + OLJFJH_03260 0.29 +0.6 612,544 + OLJFJH_03260 0.29 -0.5 612,545 - OLJFJH_03260 0.29 -2.0 612,545 - OLJFJH_03260 0.29 -2.8 612,545 - OLJFJH_03260 0.29 -1.2 612,993 - OLJFJH_03260 0.87 -2.1 612,994 + OLJFJH_03260 0.87 +2.9 612,994 + OLJFJH_03260 0.87 -2.8 612,995 - OLJFJH_03260 0.87 -1.6 612,995 - OLJFJH_03260 0.87 -2.2 612,995 - OLJFJH_03260 0.87 -1.2 612,995 - OLJFJH_03260 0.87 -0.6 613,048 - -0.3 613,063 - -0.1 613,063 - -1.1 613,238 - -1.8 613,250 + -0.8 613,433 - OLJFJH_03265 0.18 +0.6 613,569 + OLJFJH_03265 0.31 +2.9 613,570 - OLJFJH_03265 0.31 -2.6 613,589 + OLJFJH_03265 0.33 -0.5 613,590 - OLJFJH_03265 0.33 -1.1 613,591 + OLJFJH_03265 0.33 -1.4 613,592 - OLJFJH_03265 0.33 -0.2 613,592 - OLJFJH_03265 0.33 -2.1 613,742 - OLJFJH_03265 0.47 +0.6 613,831 + OLJFJH_03265 0.56 +0.0 613,832 - OLJFJH_03265 0.56 +0.5 613,832 - OLJFJH_03265 0.56 -2.0 613,832 - OLJFJH_03265 0.56 +0.8 613,870 + OLJFJH_03265 0.59 -1.3 613,870 + OLJFJH_03265 0.59 -0.6 613,870 + OLJFJH_03265 0.59 +0.1 613,871 - OLJFJH_03265 0.59 -0.9 613,871 - OLJFJH_03265 0.59 +3.0 613,873 + OLJFJH_03265 0.59 -0.9 613,873 + OLJFJH_03265 0.59 -0.1 613,874 - OLJFJH_03265 0.60 -1.6 613,874 - OLJFJH_03265 0.60 -1.8 613,874 - OLJFJH_03265 0.60 -1.7 613,874 - OLJFJH_03265 0.60 +1.2 613,964 - OLJFJH_03265 0.68 +0.5
Or see this region's nucleotide sequence