Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01725 and OLJFJH_01730 are separated by 299 nucleotides OLJFJH_01730 and OLJFJH_01735 overlap by 4 nucleotides
OLJFJH_01725: OLJFJH_01725 - RHS repeat-associated core domain-containing protein, at 294,479 to 295,249
_01725
OLJFJH_01730: OLJFJH_01730 - hypothetical protein, at 295,549 to 295,812
_01730
OLJFJH_01735: OLJFJH_01735 - hypothetical protein, at 295,809 to 297,860
_01735
Position (kb)
295
296 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 294.563 kb on - strand, within OLJFJH_01725 at 294.752 kb on - strand, within OLJFJH_01725 at 294.753 kb on + strand, within OLJFJH_01725 at 294.753 kb on + strand, within OLJFJH_01725 at 294.754 kb on - strand, within OLJFJH_01725 at 294.821 kb on - strand, within OLJFJH_01725 at 294.936 kb on + strand, within OLJFJH_01725 at 294.948 kb on - strand, within OLJFJH_01725 at 294.953 kb on - strand, within OLJFJH_01725 at 294.953 kb on - strand, within OLJFJH_01725 at 295.128 kb on + strand, within OLJFJH_01725 at 295.507 kb on - strand at 295.507 kb on - strand at 295.508 kb on + strand at 295.607 kb on + strand, within OLJFJH_01730 at 295.663 kb on + strand, within OLJFJH_01730 at 295.705 kb on + strand, within OLJFJH_01730 at 295.706 kb on - strand, within OLJFJH_01730 at 295.854 kb on + strand at 295.855 kb on - strand at 295.894 kb on - strand at 296.033 kb on + strand, within OLJFJH_01735 at 296.033 kb on + strand, within OLJFJH_01735 at 296.034 kb on - strand, within OLJFJH_01735 at 296.038 kb on + strand, within OLJFJH_01735 at 296.038 kb on + strand, within OLJFJH_01735 at 296.039 kb on - strand, within OLJFJH_01735 at 296.063 kb on + strand, within OLJFJH_01735 at 296.076 kb on - strand, within OLJFJH_01735 at 296.102 kb on + strand, within OLJFJH_01735 at 296.103 kb on - strand, within OLJFJH_01735 at 296.110 kb on + strand, within OLJFJH_01735 at 296.111 kb on - strand, within OLJFJH_01735 at 296.111 kb on - strand, within OLJFJH_01735 at 296.111 kb on - strand, within OLJFJH_01735 at 296.112 kb on + strand, within OLJFJH_01735 at 296.112 kb on + strand, within OLJFJH_01735 at 296.129 kb on + strand, within OLJFJH_01735 at 296.135 kb on + strand, within OLJFJH_01735 at 296.136 kb on - strand, within OLJFJH_01735 at 296.201 kb on + strand, within OLJFJH_01735 at 296.201 kb on + strand, within OLJFJH_01735 at 296.205 kb on - strand, within OLJFJH_01735 at 296.205 kb on - strand, within OLJFJH_01735 at 296.205 kb on - strand, within OLJFJH_01735 at 296.205 kb on - strand, within OLJFJH_01735 at 296.229 kb on - strand, within OLJFJH_01735
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-7 remove 294,563 - OLJFJH_01725 0.11 +0.4 294,752 - OLJFJH_01725 0.35 -0.1 294,753 + OLJFJH_01725 0.36 +0.4 294,753 + OLJFJH_01725 0.36 -0.3 294,754 - OLJFJH_01725 0.36 -0.8 294,821 - OLJFJH_01725 0.44 -0.5 294,936 + OLJFJH_01725 0.59 +0.4 294,948 - OLJFJH_01725 0.61 -0.6 294,953 - OLJFJH_01725 0.61 -0.5 294,953 - OLJFJH_01725 0.61 +0.7 295,128 + OLJFJH_01725 0.84 -0.4 295,507 - -1.1 295,507 - -0.1 295,508 + -0.3 295,607 + OLJFJH_01730 0.22 +0.0 295,663 + OLJFJH_01730 0.43 -0.5 295,705 + OLJFJH_01730 0.59 -0.9 295,706 - OLJFJH_01730 0.59 -1.0 295,854 + -0.3 295,855 - -0.4 295,894 - +4.0 296,033 + OLJFJH_01735 0.11 -0.6 296,033 + OLJFJH_01735 0.11 -0.7 296,034 - OLJFJH_01735 0.11 -1.1 296,038 + OLJFJH_01735 0.11 +0.1 296,038 + OLJFJH_01735 0.11 -1.2 296,039 - OLJFJH_01735 0.11 -0.3 296,063 + OLJFJH_01735 0.12 +0.5 296,076 - OLJFJH_01735 0.13 -0.1 296,102 + OLJFJH_01735 0.14 +0.3 296,103 - OLJFJH_01735 0.14 -0.3 296,110 + OLJFJH_01735 0.15 -0.3 296,111 - OLJFJH_01735 0.15 -0.4 296,111 - OLJFJH_01735 0.15 -0.2 296,111 - OLJFJH_01735 0.15 -0.8 296,112 + OLJFJH_01735 0.15 -0.2 296,112 + OLJFJH_01735 0.15 -0.2 296,129 + OLJFJH_01735 0.16 +0.0 296,135 + OLJFJH_01735 0.16 +0.2 296,136 - OLJFJH_01735 0.16 -1.4 296,201 + OLJFJH_01735 0.19 -0.3 296,201 + OLJFJH_01735 0.19 +1.1 296,205 - OLJFJH_01735 0.19 -0.4 296,205 - OLJFJH_01735 0.19 +0.2 296,205 - OLJFJH_01735 0.19 -0.9 296,205 - OLJFJH_01735 0.19 +0.8 296,229 - OLJFJH_01735 0.20 +1.3
Or see this region's nucleotide sequence