Strain Fitness in Escherichia coli ECRC100 around OKFHMN_22105

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,298,530	+	amiA	OKFHMN_22100	0.32	+0.4
4,298,714	-	amiA	OKFHMN_22100	0.53	-0.3
4,298,837	-	amiA	OKFHMN_22100	0.67	+0.3
4,299,009	-	amiA	OKFHMN_22100	0.87	-0.3
4,299,138	+				-0.1
4,299,159	+				-2.9
4,299,160	-				+0.4
4,299,160	-				+0.1
4,299,162	-				+0.0
4,299,173	+				-1.9
4,299,210	-				+0.0
4,299,225	-				+0.8
4,299,334	+				-0.1
4,299,351	+				-0.6
4,299,445	+	ypeA	OKFHMN_22105	0.25	-0.2
4,299,446	-	ypeA	OKFHMN_22105	0.25	+0.4
4,299,548	+	ypeA	OKFHMN_22105	0.49	+2.0
4,299,549	-	ypeA	OKFHMN_22105	0.50	+1.4
4,299,549	-	ypeA	OKFHMN_22105	0.50	-2.6
4,299,549	-	ypeA	OKFHMN_22105	0.50	+0.2
4,299,805	+	yfeZ	OKFHMN_22110	0.12	-0.2
4,299,890	+	yfeZ	OKFHMN_22110	0.31	-1.3
4,299,912	+	yfeZ	OKFHMN_22110	0.36	+0.6
4,299,995	+	yfeZ	OKFHMN_22110	0.54	-2.6
4,300,023	+	yfeZ	OKFHMN_22110	0.61	-0.7
4,300,054	+	yfeZ	OKFHMN_22110	0.68	-1.3
4,300,055	-	yfeZ	OKFHMN_22110	0.68	-1.5
4,300,120	+	yfeZ	OKFHMN_22110	0.82	+0.5
4,300,276	+				-0.5
4,300,276	+				-0.7
4,300,289	+				-0.1
4,300,332	-	yfeY	OKFHMN_22115	0.12	-1.5
4,300,406	-	yfeY	OKFHMN_22115	0.25	+0.5
4,300,691	+	yfeY	OKFHMN_22115	0.75	+1.0
4,300,730	+	yfeY	OKFHMN_22115	0.82	-1.2
4,300,731	-	yfeY	OKFHMN_22115	0.82	+0.8
4,300,733	+	yfeY	OKFHMN_22115	0.82	+0.1
4,300,733	+	yfeY	OKFHMN_22115	0.82	+0.3
4,300,733	+	yfeY	OKFHMN_22115	0.82	-0.3
4,300,734	-	yfeY	OKFHMN_22115	0.82	+0.0
4,300,734	-	yfeY	OKFHMN_22115	0.82	+1.8