Strain Fitness in Escherichia coli ECRC100 around OKFHMN_20600

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,007,515	+	hycE	OKFHMN_20590	0.75	+1.2
4,007,536	+	hycE	OKFHMN_20590	0.76	+0.1
4,007,537	-	hycE	OKFHMN_20590	0.76	-1.0
4,007,549	+	hycE	OKFHMN_20590	0.77	-0.2
4,007,550	-	hycE	OKFHMN_20590	0.77	+0.2
4,007,620	+	hycE	OKFHMN_20590	0.81	-0.1
4,007,625	-	hycE	OKFHMN_20590	0.81	+0.1
4,007,715	-	hycE	OKFHMN_20590	0.87	+1.0
4,007,715	-	hycE	OKFHMN_20590	0.87	+0.5
4,007,766	-	hycE	OKFHMN_20590	0.90	-3.2
4,007,866	+				-0.1
4,007,942	+				+0.3
4,007,960	-				+0.5
4,008,364	+	hycF	OKFHMN_20595	0.76	-0.2
4,008,478	+				-0.0
4,008,507	-				-0.4
4,008,741	-	hycG	OKFHMN_20600	0.32	-1.5
4,008,830	-	hycG	OKFHMN_20600	0.43	+0.7
4,008,830	-	hycG	OKFHMN_20600	0.43	+0.3
4,008,916	+	hycG	OKFHMN_20600	0.55	-0.6
4,008,916	+	hycG	OKFHMN_20600	0.55	+1.2
4,008,917	-	hycG	OKFHMN_20600	0.55	-0.8
4,008,917	-	hycG	OKFHMN_20600	0.55	+0.5
4,009,138	+	hycG	OKFHMN_20600	0.84	-0.5
4,009,138	+	hycG	OKFHMN_20600	0.84	+0.2
4,009,138	+	hycG	OKFHMN_20600	0.84	+0.8
4,009,144	-	hycG	OKFHMN_20600	0.84	-0.2
4,009,152	-	hycG	OKFHMN_20600	0.85	+0.7
4,009,254	+				+0.7
4,009,347	+	hycH	OKFHMN_20605	0.21	+0.2
4,009,348	-	hycH	OKFHMN_20605	0.21	+0.2
4,009,350	+	hycH	OKFHMN_20605	0.22	+0.5
4,009,494	+	hycH	OKFHMN_20605	0.57	-0.4
4,009,494	+	hycH	OKFHMN_20605	0.57	+0.2
4,009,592	+	hycH	OKFHMN_20605	0.81	+0.4
4,009,603	+	hycH	OKFHMN_20605	0.83	-0.3
4,009,604	-	hycH	OKFHMN_20605	0.84	-3.7
4,009,607	+	hycH	OKFHMN_20605	0.84	-0.2
4,009,620	-	hycH	OKFHMN_20605	0.88	-3.1
4,009,641	+				-1.3
4,009,641	+				-4.1
4,009,641	+				-0.1
4,009,676	+				-0.1
4,009,759	-	hycI	OKFHMN_20610	0.20	+0.1
4,009,933	-	hycI	OKFHMN_20610	0.57	-1.0
4,009,933	-	hycI	OKFHMN_20610	0.57	+0.2
4,009,974	+	hycI	OKFHMN_20610	0.66	-0.3
4,009,975	-	hycI	OKFHMN_20610	0.66	+0.1
4,010,146	+				+0.5
4,010,146	+				-1.1
4,010,147	-				+1.2
4,010,255	-				+0.1
4,010,259	-				+0.2