Strain Fitness in Escherichia coli ECRC100 around OKFHMN_19050

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,695,555	+	hybE	OKFHMN_19030	0.64	-0.3
3,695,556	-	hybE	OKFHMN_19030	0.64	+1.2
3,695,908	+	hypA	OKFHMN_19035	0.54	-0.6
3,695,909	-	hypA	OKFHMN_19035	0.54	-0.9
3,695,912	+	hypA	OKFHMN_19035	0.55	-0.3
3,695,912	+	hypA	OKFHMN_19035	0.55	+0.1
3,695,919	+	hypA	OKFHMN_19035	0.57	-0.7
3,695,921	+	hypA	OKFHMN_19035	0.58	+0.9
3,695,922	-	hypA	OKFHMN_19035	0.58	+0.5
3,696,074	-				+0.1
3,696,083	+				+0.6
3,696,148	+	hybG	OKFHMN_19040	0.28	-3.5
3,696,148	+	hybG	OKFHMN_19040	0.28	+1.6
3,696,148	+	hybG	OKFHMN_19040	0.28	+0.1
3,696,148	+	hybG	OKFHMN_19040	0.28	+0.2
3,696,149	-	hybG	OKFHMN_19040	0.29	-0.7
3,696,194	+	hybG	OKFHMN_19040	0.47	-1.4
3,696,194	+	hybG	OKFHMN_19040	0.47	-0.0
3,696,283	+	hybG	OKFHMN_19040	0.82	+0.1
3,696,283	+	hybG	OKFHMN_19040	0.82	-1.6
3,696,315	-				-0.3
3,696,341	-				-1.0
3,696,463	+				+0.1
3,696,609	+	yghU	OKFHMN_19050	0.18	-0.2
3,696,609	+	yghU	OKFHMN_19050	0.18	-0.7
3,696,609	+	yghU	OKFHMN_19050	0.18	+1.3
3,696,610	-	yghU	OKFHMN_19050	0.19	-0.2
3,696,702	+	yghU	OKFHMN_19050	0.29	+0.0
3,696,703	-	yghU	OKFHMN_19050	0.29	-0.2
3,696,724	+	yghU	OKFHMN_19050	0.32	-0.4
3,696,823	-	yghU	OKFHMN_19050	0.43	+0.6
3,696,988	+	yghU	OKFHMN_19050	0.62	+0.0
3,697,076	+	yghU	OKFHMN_19050	0.72	-1.4
3,697,077	-	yghU	OKFHMN_19050	0.72	-0.1
3,697,077	-	yghU	OKFHMN_19050	0.72	-1.6
3,697,092	+	yghU	OKFHMN_19050	0.74	-0.4
3,697,092	+	yghU	OKFHMN_19050	0.74	-0.2
3,697,135	+	yghU	OKFHMN_19050	0.79	+0.2
3,697,135	+	yghU	OKFHMN_19050	0.79	-2.0
3,697,182	-	yghU	OKFHMN_19050	0.85	+0.3
3,697,300	-				+0.5
3,697,303	+				+1.2
3,697,303	+				-0.3
3,697,304	-				-0.0
3,697,353	+				-0.7
3,697,420	+				-0.2
3,697,421	-				-0.3
3,697,421	-				+0.2
3,697,421	-				+0.2
3,697,447	-				-0.1
3,697,463	+				-1.2
3,697,464	-				+1.0
3,697,495	-				+0.3
3,697,501	+				-0.1
3,697,502	-				-3.4
3,697,507	+				+0.1
3,697,514	-				-1.6
3,697,596	-				+1.7
3,697,596	-				-0.7
3,697,655	-				+0.4
3,697,658	+				-0.2
3,697,658	+				+0.4
3,697,673	+				+1.6
3,697,674	-				-0.2
3,697,675	+				-1.0
3,697,731	-	gss	OKFHMN_19055	0.11	+0.0
3,697,801	+	gss	OKFHMN_19055	0.15	-0.2
3,697,933	-	gss	OKFHMN_19055	0.22	-0.0
3,698,039	+	gss	OKFHMN_19055	0.28	+0.0
3,698,108	+	gss	OKFHMN_19055	0.32	+0.2
3,698,109	-	gss	OKFHMN_19055	0.32	-0.5
3,698,228	+	gss	OKFHMN_19055	0.38	+0.5
3,698,228	+	gss	OKFHMN_19055	0.38	-2.1
3,698,229	-	gss	OKFHMN_19055	0.38	-0.1
3,698,274	-	gss	OKFHMN_19055	0.41	+0.1
3,698,274	-	gss	OKFHMN_19055	0.41	-3.1
3,698,276	+	gss	OKFHMN_19055	0.41	-0.0
3,698,277	-	gss	OKFHMN_19055	0.41	+0.6