Strain Fitness in Escherichia coli ECRC100 around OKFHMN_18330

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,555,521	+	agaE	OKFHMN_18320	0.81	+0.1
3,555,522	-	agaE	OKFHMN_18320	0.81	+0.1
3,555,526	-	agaE	OKFHMN_18320	0.81	-0.2
3,555,538	+	agaE	OKFHMN_18320	0.83	-0.1
3,555,682	-				-1.3
3,555,682	-				-1.1
3,555,784	+	agaW	OKFHMN_18325	0.13	+1.1
3,555,798	-	agaW	OKFHMN_18325	0.15	+0.3
3,555,838	-	agaW	OKFHMN_18325	0.20	+0.7
3,555,846	+	agaW	OKFHMN_18325	0.21	+0.2
3,555,847	-	agaW	OKFHMN_18325	0.21	-0.5
3,555,981	+	agaW	OKFHMN_18325	0.39	-0.5
3,555,986	-	agaW	OKFHMN_18325	0.39	+0.6
3,556,039	-	agaW	OKFHMN_18325	0.46	-0.3
3,556,043	+	agaW	OKFHMN_18325	0.47	+0.0
3,556,130	-	agaW	OKFHMN_18325	0.58	-0.2
3,556,142	+	agaW	OKFHMN_18325	0.59	+0.6
3,556,161	-	agaW	OKFHMN_18325	0.62	+0.5
3,556,198	+	agaW	OKFHMN_18325	0.66	-0.2
3,556,198	+	agaW	OKFHMN_18325	0.66	-1.0
3,556,199	-	agaW	OKFHMN_18325	0.67	+1.1
3,556,201	+	agaW	OKFHMN_18325	0.67	-0.2
3,556,202	-	agaW	OKFHMN_18325	0.67	+0.6
3,556,243	+	agaW	OKFHMN_18325	0.72	-0.6
3,556,335	-	agaW	OKFHMN_18325	0.84	+0.3
3,556,770	+	agaV	OKFHMN_18330	0.63	+0.5
3,556,792	-	agaV	OKFHMN_18330	0.68	-0.5
3,556,815	+	agaV	OKFHMN_18330	0.73	-0.6
3,556,935	-				+0.5
3,557,013	+				+0.5
3,557,013	+				+0.1
3,557,013	+				+0.9
3,557,131	-	kbaZ	OKFHMN_18335	0.13	+0.4
3,557,135	-	kbaZ	OKFHMN_18335	0.13	+0.3
3,557,178	-	kbaZ	OKFHMN_18335	0.17	-0.5
3,557,180	+	kbaZ	OKFHMN_18335	0.17	-0.1
3,557,199	-	kbaZ	OKFHMN_18335	0.18	+0.6
3,557,202	+	kbaZ	OKFHMN_18335	0.18	-0.2
3,557,202	+	kbaZ	OKFHMN_18335	0.18	-1.0
3,557,202	+	kbaZ	OKFHMN_18335	0.18	-0.4
3,557,202	+	kbaZ	OKFHMN_18335	0.18	+0.7
3,557,203	-	kbaZ	OKFHMN_18335	0.19	+0.7
3,557,203	-	kbaZ	OKFHMN_18335	0.19	-2.1
3,557,203	-	kbaZ	OKFHMN_18335	0.19	+0.3
3,557,203	-	kbaZ	OKFHMN_18335	0.19	+0.2
3,557,457	+	kbaZ	OKFHMN_18335	0.38	+1.8
3,557,738	+	kbaZ	OKFHMN_18335	0.60	+1.2
3,557,739	-	kbaZ	OKFHMN_18335	0.60	+0.5
3,557,900	+	kbaZ	OKFHMN_18335	0.73	-0.7
3,557,901	-	kbaZ	OKFHMN_18335	0.73	+0.3