Strain Fitness in Escherichia coli ECRC100 around OKFHMN_14545

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,804,574	+	wzxE	OKFHMN_14540	0.34	-0.4
2,804,605	+	wzxE	OKFHMN_14540	0.37	-1.2
2,804,657	+	wzxE	OKFHMN_14540	0.41	-2.1
2,804,692	+	wzxE	OKFHMN_14540	0.44	-3.2
2,804,717	+	wzxE	OKFHMN_14540	0.46	-0.6
2,804,785	+	wzxE	OKFHMN_14540	0.51	+1.1
2,804,810	+	wzxE	OKFHMN_14540	0.53	-3.2
2,804,814	+	wzxE	OKFHMN_14540	0.53	+1.0
2,805,190	+	wzxE	OKFHMN_14540	0.84	-0.1
2,805,202	+	wzxE	OKFHMN_14540	0.84	-0.7
2,805,395	+				+0.2
2,805,395	+				-2.0
2,805,396	-				+0.5
2,805,407	+				+0.0
2,805,407	+				-1.3
2,805,408	-				+0.5
2,805,408	-				+0.1
2,805,408	-				-0.5
2,805,428	-				+0.2
2,805,459	-				+0.3
2,805,459	-				-0.5
2,805,566	+	rffA	OKFHMN_14545	0.15	-0.6
2,805,566	+	rffA	OKFHMN_14545	0.15	+0.2
2,805,567	-	rffA	OKFHMN_14545	0.15	+0.6
2,805,642	+	rffA	OKFHMN_14545	0.22	-0.0
2,805,655	-	rffA	OKFHMN_14545	0.23	+0.9
2,805,735	-	rffA	OKFHMN_14545	0.30	+0.7
2,805,803	+	rffA	OKFHMN_14545	0.36	+1.0
2,805,857	+	rffA	OKFHMN_14545	0.41	-0.4
2,805,857	+	rffA	OKFHMN_14545	0.41	+0.1
2,805,857	+	rffA	OKFHMN_14545	0.41	+1.1
2,805,858	-	rffA	OKFHMN_14545	0.41	+0.7
2,805,858	-	rffA	OKFHMN_14545	0.41	-0.2
2,805,858	-	rffA	OKFHMN_14545	0.41	+0.5
2,805,858	-	rffA	OKFHMN_14545	0.41	+1.0
2,806,003	-	rffA	OKFHMN_14545	0.54	-2.7
2,806,046	+	rffA	OKFHMN_14545	0.57	+0.2
2,806,046	+	rffA	OKFHMN_14545	0.57	-0.1
2,806,093	-	rffA	OKFHMN_14545	0.62	-0.1
2,806,093	-	rffA	OKFHMN_14545	0.62	-0.4
2,806,293	-	rffA	OKFHMN_14545	0.79	-0.7
2,806,479	+				+1.9
2,806,479	+				-2.8
2,806,480	-				+1.4
2,806,480	-				+0.8
2,806,481	+				+1.0
2,806,516	-				-1.4
2,806,539	+				-0.1
2,806,540	-				+1.4
2,806,563	-				+0.7
2,806,580	+				+0.3
2,806,580	+				+0.5
2,806,581	-				+3.1
2,806,581	-				+0.7
2,806,651	-	rffC	OKFHMN_14550	0.18	-4.7
2,806,651	-	rffC	OKFHMN_14550	0.18	-1.0
2,806,727	-	rffC	OKFHMN_14550	0.29	-4.3
2,806,727	-	rffC	OKFHMN_14550	0.29	-0.8
2,806,727	-	rffC	OKFHMN_14550	0.29	-3.5
2,806,752	+	rffC	OKFHMN_14550	0.33	+0.1
2,806,839	+	rffC	OKFHMN_14550	0.45	-0.3
2,806,840	-	rffC	OKFHMN_14550	0.46	+0.4
2,806,866	+	rffC	OKFHMN_14550	0.49	+0.2
2,806,919	+	rffC	OKFHMN_14550	0.57	-0.9
2,806,920	-	rffC	OKFHMN_14550	0.57	+0.9
2,806,930	+	rffC	OKFHMN_14550	0.59	-4.8
2,806,950	-	rffC	OKFHMN_14550	0.62	+2.2
2,806,960	+	rffC	OKFHMN_14550	0.63	+1.0
2,806,961	-	rffC	OKFHMN_14550	0.64	-1.3
2,807,007	-	rffC	OKFHMN_14550	0.70	-0.8
2,807,129	-	rffC	OKFHMN_14550	0.88	+1.0
2,807,129	-	rffC	OKFHMN_14550	0.88	+1.3
2,807,129	-	rffC	OKFHMN_14550	0.88	+0.8
2,807,149	+				+0.4
2,807,150	-				+0.9
2,807,188	+				+0.3
2,807,212	-				+0.2
2,807,224	+				-0.1
2,807,456	-	rfbA	OKFHMN_14555	0.31	+0.5
2,807,474	+	rfbA	OKFHMN_14555	0.33	-2.6