Strain Fitness in Escherichia coli ECRC100 around OKFHMN_11065

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,091,114	+				+0.4
2,091,115	-				-0.1
2,091,224	+				-0.6
2,091,230	+				-0.6
2,091,233	-				+2.5
2,091,368	+				+0.8
2,091,446	+	yaaI	OKFHMN_11060	0.19	-0.2
2,091,446	+	yaaI	OKFHMN_11060	0.19	-1.1
2,091,532	+	yaaI	OKFHMN_11060	0.40	+0.7
2,091,533	-	yaaI	OKFHMN_11060	0.40	-0.3
2,091,582	+	yaaI	OKFHMN_11060	0.53	-1.1
2,091,600	-	yaaI	OKFHMN_11060	0.57	+1.5
2,091,668	+	yaaI	OKFHMN_11060	0.74	+0.2
2,091,687	-	yaaI	OKFHMN_11060	0.79	-1.2
2,091,723	-	yaaI	OKFHMN_11060	0.87	+0.8
2,091,783	-				-0.8
2,091,785	-				+0.4
2,091,785	-				+0.2
2,091,807	+				+0.3
2,091,849	+				+0.3
2,091,849	+				+0.2
2,091,850	-				+0.4
2,091,850	-				+1.2
2,091,850	-				-0.2
2,091,850	-				+0.0
2,091,863	+				+0.7
2,092,007	+	msyB	OKFHMN_11065	0.29	-0.4
2,092,008	-	msyB	OKFHMN_11065	0.29	-1.2
2,092,008	-	msyB	OKFHMN_11065	0.29	-1.1
2,092,027	-	msyB	OKFHMN_11065	0.32	+0.4
2,092,027	-	msyB	OKFHMN_11065	0.32	+0.8
2,092,057	-	msyB	OKFHMN_11065	0.36	+0.4
2,092,057	-	msyB	OKFHMN_11065	0.36	+0.3
2,092,063	+	msyB	OKFHMN_11065	0.37	+0.3
2,092,125	+	msyB	OKFHMN_11065	0.46	+0.4
2,092,126	-	msyB	OKFHMN_11065	0.46	+0.2
2,092,149	-	msyB	OKFHMN_11065	0.49	+0.7
2,092,167	+	msyB	OKFHMN_11065	0.52	+0.3
2,092,167	+	msyB	OKFHMN_11065	0.52	+0.2
2,092,197	+	msyB	OKFHMN_11065	0.56	-0.5
2,092,197	+	msyB	OKFHMN_11065	0.56	-0.1
2,092,198	-	msyB	OKFHMN_11065	0.56	-0.2
2,092,277	+	msyB	OKFHMN_11065	0.67	-0.1
2,092,352	+	msyB	OKFHMN_11065	0.77	+0.2
2,092,513	+				+0.2
2,092,580	+				+0.5
2,092,583	+				+0.3
2,092,584	-				-0.1
2,092,611	-				+1.4
2,092,661	-				+0.5
2,092,672	+				+0.3
2,092,672	+				-0.1
2,092,673	-				-0.7
2,092,746	+	satP	OKFHMN_11070	0.15	-0.0
2,092,746	+	satP	OKFHMN_11070	0.15	+0.3
2,092,746	+	satP	OKFHMN_11070	0.15	+0.2
2,092,746	+	satP	OKFHMN_11070	0.15	+0.3
2,092,747	-	satP	OKFHMN_11070	0.15	-1.4
2,092,747	-	satP	OKFHMN_11070	0.15	+0.1
2,092,772	-	satP	OKFHMN_11070	0.20	-0.0
2,092,858	-	satP	OKFHMN_11070	0.35	-0.3
2,092,858	-	satP	OKFHMN_11070	0.35	-1.4
2,092,874	+	satP	OKFHMN_11070	0.38	-1.3
2,092,874	+	satP	OKFHMN_11070	0.38	+0.1
2,092,875	-	satP	OKFHMN_11070	0.38	-0.1
2,092,965	-	satP	OKFHMN_11070	0.54	-0.2
2,092,983	+	satP	OKFHMN_11070	0.57	-1.5
2,092,984	-	satP	OKFHMN_11070	0.57	+0.8
2,092,984	-	satP	OKFHMN_11070	0.57	-0.1
2,092,984	-	satP	OKFHMN_11070	0.57	+0.2
2,092,987	+	satP	OKFHMN_11070	0.57	+3.4
2,092,987	+	satP	OKFHMN_11070	0.57	+0.2
2,092,988	-	satP	OKFHMN_11070	0.58	+0.4
2,092,988	-	satP	OKFHMN_11070	0.58	-0.6
2,093,156	+	satP	OKFHMN_11070	0.87	+0.5
2,093,156	+	satP	OKFHMN_11070	0.87	-0.3
2,093,332	+	mog	OKFHMN_11075	0.12	+0.8
2,093,332	+	mog	OKFHMN_11075	0.12	+1.3
2,093,332	+	mog	OKFHMN_11075	0.12	+1.0
2,093,332	+	mog	OKFHMN_11075	0.12	+0.2
2,093,333	-	mog	OKFHMN_11075	0.12	+1.0
2,093,365	-	mog	OKFHMN_11075	0.18	-0.0
2,093,432	+	mog	OKFHMN_11075	0.29	-0.2
2,093,433	-	mog	OKFHMN_11075	0.29	+0.3
2,093,460	-	mog	OKFHMN_11075	0.34	-0.2