Strain Fitness in Escherichia coli ECRC100 around OKFHMN_05935

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,047,887	-	ulaA	OKFHMN_05930	0.88	+1.0
1,048,153	+				+1.2
1,048,154	-				-1.5
1,048,309	+				-3.2
1,048,340	-				-0.1
1,048,340	-				-2.9
1,048,408	+				-0.2
1,048,482	+	rlmC	OKFHMN_05935	0.12	-1.0
1,048,724	-	rlmC	OKFHMN_05935	0.34	+0.1
1,048,761	+	rlmC	OKFHMN_05935	0.37	-1.3
1,048,761	+	rlmC	OKFHMN_05935	0.37	+0.0
1,048,761	+	rlmC	OKFHMN_05935	0.37	-1.6
1,048,762	-	rlmC	OKFHMN_05935	0.37	-1.7
1,048,762	-	rlmC	OKFHMN_05935	0.37	+1.4
1,048,762	-	rlmC	OKFHMN_05935	0.37	+0.0
1,048,762	-	rlmC	OKFHMN_05935	0.37	-0.9
1,048,910	+	rlmC	OKFHMN_05935	0.50	+0.3
1,048,941	+	rlmC	OKFHMN_05935	0.53	-2.3
1,048,945	+	rlmC	OKFHMN_05935	0.53	+0.6
1,049,132	+	rlmC	OKFHMN_05935	0.70	-1.2
1,049,275	-	rlmC	OKFHMN_05935	0.83	+0.8
1,049,299	-	rlmC	OKFHMN_05935	0.85	+0.4
1,049,373	+				-0.1
1,049,470	-				+0.6
1,049,504	+				+0.1
1,049,504	+				+0.2
1,049,511	+				-4.0
1,049,899	+	ybjO	OKFHMN_05940	0.80	-0.1
1,049,899	+	ybjO	OKFHMN_05940	0.80	-0.5
1,050,018	-				-0.1
1,050,027	+				+0.6
1,050,028	-				-0.2
1,050,028	-				-0.7
1,050,028	-				+1.1
1,050,028	-				+0.5
1,050,032	-				+2.6
1,050,120	-				+0.8
1,050,170	-	potI	OKFHMN_05945	0.13	-0.1
1,050,289	-	potI	OKFHMN_05945	0.27	-4.6
1,050,394	+	potI	OKFHMN_05945	0.40	+0.9
1,050,429	+	potI	OKFHMN_05945	0.44	+0.4
1,050,443	+	potI	OKFHMN_05945	0.46	+0.5