Strain Fitness in Escherichia coli ECRC100 around OKFHMN_22530

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
4,380,781	+	intS	OKFHMN_22520	0.43	+0.1
4,380,899	-	intS	OKFHMN_22520	0.54	+0.4
4,380,905	-	intS	OKFHMN_22520	0.54	+0.3
4,381,126	+	intS	OKFHMN_22520	0.73	+0.3
4,381,127	-	intS	OKFHMN_22520	0.73	-1.1
4,381,240	+	intS	OKFHMN_22520	0.83	+0.1
4,381,240	+	intS	OKFHMN_22520	0.83	+2.0
4,381,328	+				-0.3
4,381,344	-				-0.7
4,381,353	+				+2.1
4,381,353	+				-2.2
4,381,354	-				-0.6
4,381,369	+				-0.2
4,381,370	-				+0.5
4,381,649	+	Arg_trna	OKFHMN_22525	0.69	+0.5
4,381,652	-	Arg_trna	OKFHMN_22525	0.73	+0.7
4,381,652	-	Arg_trna	OKFHMN_22525	0.73	+1.0
4,381,660	-	Arg_trna	OKFHMN_22525	0.84	+0.6
4,381,664	-				-0.7
4,381,685	+				+1.2
4,381,685	+				+0.8
4,381,686	-				-0.2
4,381,714	-				+1.0
4,381,869	+	yfdC	OKFHMN_22530	0.13	-2.6
4,381,870	-	yfdC	OKFHMN_22530	0.13	+0.5
4,381,945	-	yfdC	OKFHMN_22530	0.21	+0.2
4,382,031	+	yfdC	OKFHMN_22530	0.30	+2.0
4,382,032	-	yfdC	OKFHMN_22530	0.31	+1.6
4,382,075	-	yfdC	OKFHMN_22530	0.35	+0.1
4,382,075	-	yfdC	OKFHMN_22530	0.35	+1.5
4,382,199	+	yfdC	OKFHMN_22530	0.48	-0.1
4,382,202	-	yfdC	OKFHMN_22530	0.49	+0.0
4,382,202	-	yfdC	OKFHMN_22530	0.49	-0.5
4,382,202	-	yfdC	OKFHMN_22530	0.49	+0.8
4,382,275	+	yfdC	OKFHMN_22530	0.57	+0.3
4,382,315	-	yfdC	OKFHMN_22530	0.61	+0.0
4,382,315	-	yfdC	OKFHMN_22530	0.61	+0.8
4,382,374	-	yfdC	OKFHMN_22530	0.67	-0.0
4,382,385	+	yfdC	OKFHMN_22530	0.68	+0.7
4,382,385	+	yfdC	OKFHMN_22530	0.68	+1.0
4,382,386	-	yfdC	OKFHMN_22530	0.68	-0.6
4,382,597	-				-1.2
4,382,597	-				+0.2
4,382,697	+				+0.5
4,382,697	+				-0.2
4,382,705	-				-2.8
4,382,706	+				-0.4
4,382,707	-				-2.6
4,382,707	-				-0.2
4,382,707	-				+0.5
4,382,710	+				-0.6
4,382,749	+				+1.4
4,382,750	-				+0.3
4,382,806	+				+1.3
4,382,826	-				+0.6
4,382,833	+				+0.5
4,382,883	+				+0.2
4,382,884	-				+0.3
4,382,900	-				-0.1
4,382,945	+				+0.3
4,382,945	+				+0.3
4,383,009	-				-0.2
4,383,090	+	mlaA	OKFHMN_22535	0.15	+0.1
4,383,091	-	mlaA	OKFHMN_22535	0.16	-3.7
4,383,109	+	mlaA	OKFHMN_22535	0.18	+0.7
4,383,112	+	mlaA	OKFHMN_22535	0.18	-1.5
4,383,122	+	mlaA	OKFHMN_22535	0.20	+0.2
4,383,156	+	mlaA	OKFHMN_22535	0.24	+0.2
4,383,156	+	mlaA	OKFHMN_22535	0.24	-0.9
4,383,156	+	mlaA	OKFHMN_22535	0.24	+0.4
4,383,227	+	mlaA	OKFHMN_22535	0.34	+0.4
4,383,227	+	mlaA	OKFHMN_22535	0.34	+1.0
4,383,231	+	mlaA	OKFHMN_22535	0.34	+0.9
4,383,232	-	mlaA	OKFHMN_22535	0.34	-0.3
4,383,314	+	mlaA	OKFHMN_22535	0.45	-2.9
4,383,429	+	mlaA	OKFHMN_22535	0.60	-1.2
4,383,434	+	mlaA	OKFHMN_22535	0.61	-2.1
4,383,601	-	mlaA	OKFHMN_22535	0.83	-1.9
4,383,602	+	mlaA	OKFHMN_22535	0.83	+0.9
4,383,602	+	mlaA	OKFHMN_22535	0.83	-0.5
4,383,602	+	mlaA	OKFHMN_22535	0.83	+0.1
4,383,602	+	mlaA	OKFHMN_22535	0.83	+0.5
4,383,603	-	mlaA	OKFHMN_22535	0.83	-0.6
4,383,606	-	mlaA	OKFHMN_22535	0.84	-1.2