Strain Fitness in Escherichia coli ECRC100 around OKFHMN_19605

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,804,583	+				+1.3
3,804,583	+				+0.4
3,804,590	+				+1.0
3,804,591	-				+0.1
3,804,672	+				-2.4
3,804,736	+	idi	OKFHMN_19595	0.20	-0.6
3,804,736	+	idi	OKFHMN_19595	0.20	+0.6
3,804,736	+	idi	OKFHMN_19595	0.20	-1.2
3,804,737	-	idi	OKFHMN_19595	0.20	+0.3
3,804,737	-	idi	OKFHMN_19595	0.20	+0.1
3,804,900	+	idi	OKFHMN_19595	0.50	-0.8
3,804,987	+	idi	OKFHMN_19595	0.65	-0.0
3,805,036	+	idi	OKFHMN_19595	0.74	-1.3
3,805,037	-	idi	OKFHMN_19595	0.74	+1.6
3,805,037	-	idi	OKFHMN_19595	0.74	+0.7
3,805,191	-				-1.3
3,805,191	-				+0.8
3,805,316	+	yqfG	OKFHMN_19600	0.13	+1.0
3,805,317	-	yqfG	OKFHMN_19600	0.14	+0.2
3,805,317	-	yqfG	OKFHMN_19600	0.14	+2.0
3,805,428	-				-3.5
3,805,428	-				-0.3
3,805,473	+				-0.7
3,805,473	+				+0.4
3,805,474	-				+0.8
3,805,474	-				+1.0
3,805,474	-				-1.4
3,805,474	-				-0.9
3,805,474	-				-0.7
3,805,474	-				+0.4
3,805,474	-				+0.4
3,805,477	+				-0.1
3,805,478	-				-0.0
3,805,492	+				+0.1
3,805,501	-				+0.3
3,805,590	+	uacT	OKFHMN_19605	0.11	-2.0
3,805,603	+	uacT	OKFHMN_19605	0.12	-0.8
3,805,694	+	uacT	OKFHMN_19605	0.18	+0.2
3,805,718	+	uacT	OKFHMN_19605	0.20	+0.2
3,805,719	-	uacT	OKFHMN_19605	0.20	+1.1
3,805,857	+	uacT	OKFHMN_19605	0.30	+0.9
3,805,872	+	uacT	OKFHMN_19605	0.31	-0.0
3,806,004	+	uacT	OKFHMN_19605	0.40	+0.3
3,806,032	+	uacT	OKFHMN_19605	0.42	+0.0
3,806,083	+	uacT	OKFHMN_19605	0.45	-1.6
3,806,084	-	uacT	OKFHMN_19605	0.45	+0.8
3,806,228	-	uacT	OKFHMN_19605	0.55	-0.7
3,806,239	+	uacT	OKFHMN_19605	0.56	+0.3
3,806,395	-	uacT	OKFHMN_19605	0.67	-0.3
3,806,440	+	uacT	OKFHMN_19605	0.70	-0.8
3,806,563	+	uacT	OKFHMN_19605	0.78	+0.0
3,806,586	+	uacT	OKFHMN_19605	0.80	-0.0
3,806,587	-	uacT	OKFHMN_19605	0.80	+0.5
3,806,628	+	uacT	OKFHMN_19605	0.83	+1.5
3,806,673	+	uacT	OKFHMN_19605	0.86	+0.0
3,806,688	+	uacT	OKFHMN_19605	0.87	+0.6
3,806,689	-	uacT	OKFHMN_19605	0.87	+3.2
3,806,724	+	uacT	OKFHMN_19605	0.90	+0.6
3,806,750	+				+0.0
3,806,750	+				-2.7
3,806,751	-				-1.8
3,806,801	-				+0.4
3,806,801	-				-3.7
3,806,801	-				+0.1
3,806,803	+				+0.2
3,806,803	+				+0.1
3,806,863	+				+0.7
3,806,863	+				-0.8
3,806,864	-				+0.6
3,806,980	+				-0.2
3,807,057	+				+0.0
3,807,080	+				+1.1
3,807,243	-				+0.3
3,807,243	-				+0.6
3,807,246	-				+2.7
3,807,247	+				+0.3
3,807,346	-				+0.4
3,807,347	+				+0.3
3,807,347	+				+0.1
3,807,444	-				-0.4
3,807,444	-				+0.1
3,807,548	+	ygfT	OKFHMN_19610	0.12	+0.1
3,807,549	-	ygfT	OKFHMN_19610	0.12	-0.4
3,807,743	+	ygfT	OKFHMN_19610	0.23	+1.2
3,807,743	+	ygfT	OKFHMN_19610	0.23	+1.0
3,807,743	+	ygfT	OKFHMN_19610	0.23	-0.2
3,807,849	+	ygfT	OKFHMN_19610	0.28	+0.1