Strain Fitness in Escherichia coli ECRC100 around OKFHMN_18340

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,557,738	+	kbaZ	OKFHMN_18335	0.60	-1.0
3,557,739	-	kbaZ	OKFHMN_18335	0.60	-0.6
3,557,900	+	kbaZ	OKFHMN_18335	0.73	+0.3
3,557,901	-	kbaZ	OKFHMN_18335	0.73	+0.4
3,558,070	-	kbaZ	OKFHMN_18335	0.86	+0.5
3,558,088	+	kbaZ	OKFHMN_18335	0.88	-1.6
3,558,267	-				+0.2
3,558,373	-				+0.6
3,558,495	-				+2.1
3,558,495	-				-0.9
3,558,501	-				+0.7
3,558,615	+	agaR	OKFHMN_18340	0.15	+0.7
3,558,615	+	agaR	OKFHMN_18340	0.15	+0.3
3,558,615	+	agaR	OKFHMN_18340	0.15	-0.1
3,558,887	-	agaR	OKFHMN_18340	0.48	+0.1
3,559,091	+	agaR	OKFHMN_18340	0.74	-1.2
3,559,190	+	agaR	OKFHMN_18340	0.86	+0.6
3,559,191	-	agaR	OKFHMN_18340	0.86	+1.0
3,559,211	+	agaR	OKFHMN_18340	0.88	+0.1
3,559,444	+	yhaV	OKFHMN_18345	0.18	+0.0
3,559,445	-	yhaV	OKFHMN_18345	0.18	+0.4
3,559,465	+	yhaV	OKFHMN_18345	0.23	+0.9
3,559,646	+	yhaV	OKFHMN_18345	0.62	+0.9
3,559,647	-	yhaV	OKFHMN_18345	0.62	+0.3
3,559,680	+	yhaV	OKFHMN_18345	0.69	+0.3
3,559,728	+	yhaV	OKFHMN_18345	0.79	+0.8
3,559,749	+	yhaV	OKFHMN_18345	0.84	+0.8
3,559,750	-	yhaV	OKFHMN_18345	0.84	-2.7
3,559,759	+	yhaV	OKFHMN_18345	0.86	-1.6
3,559,760	-	yhaV	OKFHMN_18345	0.86	-0.7
3,559,786	+				-2.3
3,559,787	-				+0.6
3,559,787	-				-0.9
3,559,787	-				+1.7
3,559,963	+	prlF	OKFHMN_18350	0.42	+0.6
3,559,963	+	prlF	OKFHMN_18350	0.42	-0.0
3,559,963	+	prlF	OKFHMN_18350	0.42	-0.4
3,559,966	+	prlF	OKFHMN_18350	0.43	+0.8
3,559,966	+	prlF	OKFHMN_18350	0.43	+2.3
3,559,966	+	prlF	OKFHMN_18350	0.43	+0.0
3,560,000	-	prlF	OKFHMN_18350	0.53	-0.2
3,560,003	+	prlF	OKFHMN_18350	0.54	-0.0
3,560,003	+	prlF	OKFHMN_18350	0.54	+1.4
3,560,003	+	prlF	OKFHMN_18350	0.54	-1.3
3,560,061	-	prlF	OKFHMN_18350	0.71	-0.4
3,560,086	+	prlF	OKFHMN_18350	0.78	-1.0
3,560,086	+	prlF	OKFHMN_18350	0.78	-0.1
3,560,129	+				-0.8
3,560,130	-				+0.7
3,560,229	+				-1.2
3,560,250	+				+0.4