Strain Fitness in Escherichia coli ECRC100 around OKFHMN_14935

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,888,797	+				+0.8
2,888,830	+				+1.1
2,888,841	+				+1.5
2,888,849	-				-0.2
2,888,882	-				-1.3
2,888,920	-				-1.7
2,888,939	+				+0.0
2,888,940	-				+0.5
2,889,046	-	yieH	OKFHMN_14930	0.17	+0.7
2,889,068	+	yieH	OKFHMN_14930	0.21	-0.2
2,889,216	+	yieH	OKFHMN_14930	0.43	+1.1
2,889,216	+	yieH	OKFHMN_14930	0.43	-2.1
2,889,217	-	yieH	OKFHMN_14930	0.43	+1.9
2,889,295	+	yieH	OKFHMN_14930	0.55	-0.7
2,889,296	-	yieH	OKFHMN_14930	0.55	+0.4
2,889,360	-	yieH	OKFHMN_14930	0.65	+0.1
2,889,360	-	yieH	OKFHMN_14930	0.65	-0.7
2,889,360	-	yieH	OKFHMN_14930	0.65	-0.0
2,889,618	-				+2.1
2,889,702	-				+1.2
2,889,759	+				-1.7
2,889,759	+				+1.0
2,889,760	-				+0.8
2,889,869	-				+0.6
2,889,890	+				-0.3
2,889,890	+				+0.2
2,889,891	-				+0.1
2,889,959	-	adeP	OKFHMN_14935	0.15	-0.1
2,889,959	-	adeP	OKFHMN_14935	0.15	-0.5
2,889,986	-	adeP	OKFHMN_14935	0.17	-0.5
2,889,988	+	adeP	OKFHMN_14935	0.17	+1.3
2,889,988	+	adeP	OKFHMN_14935	0.17	+0.2
2,889,988	+	adeP	OKFHMN_14935	0.17	+0.3
2,889,988	+	adeP	OKFHMN_14935	0.17	-0.4
2,889,989	-	adeP	OKFHMN_14935	0.17	-1.0
2,890,349	-	adeP	OKFHMN_14935	0.44	+0.1
2,890,437	-	adeP	OKFHMN_14935	0.51	-2.9
2,890,467	+	adeP	OKFHMN_14935	0.53	-0.8
2,890,488	+	adeP	OKFHMN_14935	0.54	+0.4
2,890,657	+	adeP	OKFHMN_14935	0.67	-1.3
2,890,658	-	adeP	OKFHMN_14935	0.67	-0.4
2,890,687	+	adeP	OKFHMN_14935	0.69	+0.1
2,890,706	+	adeP	OKFHMN_14935	0.71	-1.0
2,890,706	+	adeP	OKFHMN_14935	0.71	-0.5
2,890,707	-	adeP	OKFHMN_14935	0.71	+0.8
2,890,850	+	adeP	OKFHMN_14935	0.81	+0.2
2,890,925	-	adeP	OKFHMN_14935	0.87	+0.5
2,890,925	-	adeP	OKFHMN_14935	0.87	-0.3
2,891,033	-				-0.2
2,891,043	+				-1.1
2,891,079	+				-0.4
2,891,336	+	yieF	OKFHMN_14940	0.32	-0.4
2,891,337	-	yieF	OKFHMN_14940	0.33	+0.2
2,891,465	+	yieF	OKFHMN_14940	0.55	-0.1
2,891,465	+	yieF	OKFHMN_14940	0.55	+1.3
2,891,465	+	yieF	OKFHMN_14940	0.55	+0.6
2,891,465	+	yieF	OKFHMN_14940	0.55	+0.1
2,891,465	+	yieF	OKFHMN_14940	0.55	+0.6
2,891,466	-	yieF	OKFHMN_14940	0.55	-2.2
2,891,466	-	yieF	OKFHMN_14940	0.55	-2.0
2,891,469	+	yieF	OKFHMN_14940	0.56	+0.2
2,891,470	-	yieF	OKFHMN_14940	0.56	-1.1
2,891,573	+	yieF	OKFHMN_14940	0.74	+0.4
2,891,643	+	yieF	OKFHMN_14940	0.87	+1.7
2,891,643	+	yieF	OKFHMN_14940	0.87	-0.3
2,891,644	-	yieF	OKFHMN_14940	0.87	+0.2
2,891,644	-	yieF	OKFHMN_14940	0.87	-2.6
2,891,695	-				-1.0
2,891,718	+				+0.1
2,891,718	+				+0.1
2,891,718	+				-0.0
2,891,719	-				-0.2
2,891,719	-				-0.4
2,891,719	-				-2.9
2,891,766	+				+0.2
2,891,800	-				-0.2
2,891,857	+	yieE	OKFHMN_14945	0.16	+1.3
2,891,858	-	yieE	OKFHMN_14945	0.16	-0.2
2,891,858	-	yieE	OKFHMN_14945	0.16	+0.3
2,891,941	+	yieE	OKFHMN_14945	0.27	-0.3
2,891,950	+	yieE	OKFHMN_14945	0.28	+0.7
2,892,029	-	yieE	OKFHMN_14945	0.39	-2.7
2,892,034	+	yieE	OKFHMN_14945	0.39	-1.3