Strain Fitness in Escherichia coli ECRC100 around OKFHMN_14810

Experiment: L-Arabinose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntatpB and atpE are separated by 46 nucleotidesatpE and atpF are separated by 61 nucleotidesatpF and atpH are separated by 14 nucleotidesatpH and atpA are separated by 12 nucleotides OKFHMN_14800: atpB - F0F1 ATP synthase subunit A, at 2,859,585 to 2,860,400 atpB OKFHMN_14805: atpE - F0F1 ATP synthase subunit C, at 2,860,447 to 2,860,686 atpE OKFHMN_14810: atpF - F0F1 ATP synthase subunit B, at 2,860,748 to 2,861,218 atpF OKFHMN_14815: atpH - F0F1 ATP synthase subunit delta, at 2,861,233 to 2,861,766 atpH OKFHMN_14820: atpA - F0F1 ATP synthase subunit alpha, at 2,861,779 to 2,863,320 atpA Position (kb) 2860 2861 2862Strain fitness (log2 ratio) -1 0 1at 2860.398 kb on + strandat 2860.398 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arabinose
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2,860,398 + -0.8
2,860,398 + +0.3

Or see this region's nucleotide sequence