Strain Fitness in Escherichia coli ECRC100 around OKFHMN_13345

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,564,694	+	zraP	OKFHMN_13335	0.39	+0.6
2,564,740	-	zraP	OKFHMN_13335	0.50	-0.1
2,564,746	-	zraP	OKFHMN_13335	0.51	+1.4
2,564,746	-	zraP	OKFHMN_13335	0.51	-0.6
2,564,746	-	zraP	OKFHMN_13335	0.51	+0.2
2,564,830	+	zraP	OKFHMN_13335	0.71	+0.0
2,564,839	+	zraP	OKFHMN_13335	0.73	+0.3
2,564,934	-				-1.1
2,564,952	+				-1.1
2,564,952	+				+0.4
2,564,953	-				+0.1
2,564,953	-				-1.1
2,565,008	-				-1.5
2,565,013	+				-0.4
2,565,094	+	yjaH	OKFHMN_13340	0.22	+0.2
2,565,203	-	yjaH	OKFHMN_13340	0.39	-0.4
2,565,247	+	yjaH	OKFHMN_13340	0.46	-0.1
2,565,303	+	yjaH	OKFHMN_13340	0.55	+0.5
2,565,304	-	yjaH	OKFHMN_13340	0.55	+0.1
2,565,666	-				+0.2
2,565,669	+				-1.5
2,565,670	-				-1.4
2,565,710	-	hupA	OKFHMN_13345	0.17	-0.2
2,565,714	+	hupA	OKFHMN_13345	0.18	-0.2
2,565,715	-	hupA	OKFHMN_13345	0.19	-2.3
2,565,812	-	hupA	OKFHMN_13345	0.54	-2.1
2,565,910	+				-0.8
2,565,911	-				-0.9
2,565,936	+				-2.3
2,565,936	+				-0.5
2,565,937	-				+1.3
2,565,941	+				+0.5
2,565,947	+				-0.0
2,565,998	+				-1.2
2,566,013	+				-0.1
2,566,053	-				+0.8
2,566,104	+				+0.0
2,566,105	-				+0.4
2,566,105	-				+1.5
2,566,124	+				-3.2
2,566,180	-				+0.5
2,566,180	-				-0.0
2,566,180	-				-1.8
2,566,190	-	yjaG	OKFHMN_13350	0.11	-2.5
2,566,190	-	yjaG	OKFHMN_13350	0.11	-0.0
2,566,264	+	yjaG	OKFHMN_13350	0.24	-4.1
2,566,264	+	yjaG	OKFHMN_13350	0.24	-2.2
2,566,265	-	yjaG	OKFHMN_13350	0.24	+0.5
2,566,354	-	yjaG	OKFHMN_13350	0.39	-2.7
2,566,354	-	yjaG	OKFHMN_13350	0.39	+1.1
2,566,443	-	yjaG	OKFHMN_13350	0.54	-2.6
2,566,517	-	yjaG	OKFHMN_13350	0.67	+0.2
2,566,563	+	yjaG	OKFHMN_13350	0.74	+0.5
2,566,564	-	yjaG	OKFHMN_13350	0.75	-0.9
2,566,617	-	yjaG	OKFHMN_13350	0.84	-1.2
2,566,708	+				-1.0
2,566,709	-				-0.7
2,566,773	+				+0.5
2,566,773	+				-0.2
2,566,775	+				+0.2
2,566,861	+	nfi	OKFHMN_13355	0.16	+0.1
2,566,909	-	nfi	OKFHMN_13355	0.23	+1.7
2,566,909	-	nfi	OKFHMN_13355	0.23	+4.3
2,566,912	+	nfi	OKFHMN_13355	0.23	+0.1